RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 CBX8Q9HC52 389 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 PCDH18Q9HCL0 1135 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 THSD1Q9NS62 852 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 ANAPC7Q9UJX3 599 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 GPR34Q9UPC5 381 aa13.36□□□□□ -0.27
PFDN1-206ENST00000514611 A0A1W2PQM1 296 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 HTRA2O43464 458 aaPredicted RBP13.35□□□□□ -0.27
PFDN1-206ENST00000514611 CPP00450 1065 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 TNFP01375 233 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 CD48P09326 243 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 LHCGRP22888 699 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 RENBPP51606 427 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 FANCCQ00597 558 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 PTPRRQ15256 657 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 DENND2CQ68D51 928 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 LVRNQ6Q4G3 990 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 IGF2-ASQ6U949 168 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 GPR155Q7Z3F1 870 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 CPNE8Q86YQ8 564 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 ATL2Q8NHH9 583 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 CCL4L1Q8NHW4 92 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 SCG3Q8WXD2 468 aaKnown RBP13.35□□□□□ -0.27
PFDN1-206ENST00000514611 NUS1Q96E22 293 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 SLC46A1Q96NT5 459 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 NUDCD1Q96RS6 583 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 NUP85Q9BW27 656 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 FOXP3Q9BZS1 431 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 TMEM168Q9H0V1 697 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 WDR26Q9H7D7 661 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 NOD2Q9HC29 1040 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 CPNE5Q9HCH3 593 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 PCDHGA8Q9Y5G5 932 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 DGKBQ9Y6T7 804 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 ANKRD36A6QL64 1941 aa13.35□□□□□ -0.27
PFDN1-206ENST00000514611 ATRXP46100 2492 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 A0A087X0T9 212 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.34□□□□□ -0.27
PFDN1-206ENST00000514611 A0A1W2PQJ5 194 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 NPIPB15A6NHN6 443 aaPredicted RBP13.34□□□□□ -0.27
PFDN1-206ENST00000514611 B4DGG1 531 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 D6RAR5 112 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 ATXN7O15265 892 aaPredicted RBP13.34□□□□□ -0.27
PFDN1-206ENST00000514611 KLK10O43240 276 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 MFSD11O43934 449 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 SOCS5O75159 536 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 C1QL1O75973 258 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 RPLP0P05388 317 aaKnown RBP13.34□□□□□ -0.27
PFDN1-206ENST00000514611 FAM228BP0C875 321 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 RBMS1P29558 406 aaKnown RBP13.34□□□□□ -0.27
PFDN1-206ENST00000514611 POLR2LP62875 67 aaKnown RBP13.34□□□□□ -0.27
PFDN1-206ENST00000514611 CCL7P80098 99 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 MMRN1Q13201 1228 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 PIGHQ14442 188 aaPredicted RBP13.34□□□□□ -0.27
PFDN1-206ENST00000514611 BOLA3Q53S33 107 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 PNCKQ6P2M8 343 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 TAF8Q7Z7C8 310 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 NIPA2Q8N8Q9 360 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 GPR156Q8NFN8 814 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 WDR48Q8TAF3 677 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 CPLX3Q8WVH0 158 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 TEKT4Q8WW24 435 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 SLC39A7Q92504 469 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 GRAMD1AQ96CP6 724 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 COQ10AQ96MF6 247 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 SUDS3Q9H7L9 328 aaPredicted RBP13.34□□□□□ -0.27
PFDN1-206ENST00000514611 CYP4F12Q9HCS2 524 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 MOSPD1Q9UJG1 213 aa13.34□□□□□ -0.27
PFDN1-206ENST00000514611 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 A0A0U1RQS6 177 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 TEX51A0A1B0GUA7 166 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 PRSS38A1L453 326 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 CDRT15L2A8MXV6 281 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 NOBOXO60393 691 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 HEXIM1O94992 359 aaKnown RBP13.33□□□□□ -0.28
PFDN1-206ENST00000514611 TNFSF15O95150 251 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 MAP3K6O95382 1288 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 GYPCP04921 128 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 SERPING1P05155 500 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 VIPR1P32241 457 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 SERPINB6P35237 376 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 GJC1P36383 396 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 TRIM23P36406 574 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 HSPA9P38646 679 aaKnown RBP13.33□□□□□ -0.28
PFDN1-206ENST00000514611 ETV3P41162 512 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 MMP13P45452 471 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 CDH6P55285 790 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 UBASH3AP57075 661 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 TMPRSS3P57727 454 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 SKOR1P84550 965 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 KRT81Q14533 505 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 ARHGAP40Q5TG30 622 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 BROXQ5VW32 411 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 PCSK4Q6UW60 755 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 HSD11B1LQ7Z5J1 315 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 TSPAN33Q86UF1 283 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 HEATR4Q86WZ0 1026 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 FAM46DQ8NEK8 389 aa13.33□□□□□ -0.28
PFDN1-206ENST00000514611 WDR36Q8NI36 951 aaKnown RBP13.33□□□□□ -0.28
PFDN1-206ENST00000514611 PTCD2Q8WV60 388 aaKnown RBP13.33□□□□□ -0.28
PFDN1-206ENST00000514611 SPOCK2Q92563 424 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms