RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 FBXO9Q9UK97 447 aaPredicted RBP5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 FZD10Q9ULW2 581 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 STON1Q9Y6Q2 735 aa5.26□□□□□ -1.57
HMGCS1-207ENST00000514610 IGHV4-28A0A0C4DH34 117 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 TMEM202A6NGA9 273 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 CD8B2A6NJW9 211 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 TIPRLO75663 272 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 GFPT2O94808 682 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 FTCDO95954 541 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 GARSP41250 739 aaKnown RBP5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 NUDT6P53370 316 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 Q0VFX4 171 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 FOXD4Q12950 439 aaPredicted RBP5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 NAE1Q13564 534 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 ZNF260Q3ZCT1 412 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 AWAT2Q6E213 333 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 SHFQ7M4L6 423 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 CCDC13Q8IYE1 715 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 TTC39CQ8N584 583 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 AADATQ8N5Z0 425 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 SCARB1Q8WTV0 552 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 OTULINQ96BN8 352 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 SDF4Q9BRK5 362 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 IL36RNQ9UBH0 155 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 TBC1D29Q9UFV1 150 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 LYVE1Q9Y5Y7 322 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 CACNA1IQ9P0X4 2223 aa5.25□□□□□ -1.57
HMGCS1-207ENST00000514610 A0A1B0GVM2 712 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 FRMD3A2A2Y4 597 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 ANKRD18BA2A2Z9 1011 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 DYTNA2CJ06 578 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 WNT9BO14905 357 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 HSPA12AO43301 675 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 MTA2O94776 668 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 OR2C1O95371 312 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 IPO7O95373 1038 aaKnown RBP5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 VNN2O95498 520 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 CDH2P19022 906 aaPredicted RBP5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 BDNFP23560 247 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 HOXD13P35453 343 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 PPARGP37231 505 aaPredicted RBP5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 EIF2S3P41091 472 aaKnown RBP5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 UBA7P41226 1012 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 MXI1P50539 228 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 CLCN3P51790 818 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 GOLGA8DPQ0D2H9 430 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 NIPAL4Q0D2K0 466 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 EFNB3Q15768 340 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 USP41Q3LFD5 358 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 CDONQ4KMG0 1287 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 PLEKHA7Q6IQ23 1121 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 CFAP161Q6P656 301 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 ZNF549Q6P9A3 640 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 KLHL35Q6PF15 583 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 DLK2Q6UY11 383 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 FASTKD5Q7L8L6 764 aaKnown RBP5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 WDR63Q8IWG1 891 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 SCCPDHQ8NBX0 429 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 AGBL3Q8NEM8 1001 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 C1orf74Q96LT6 269 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 FTOQ9C0B1 505 aaKnown RBP eCLIP5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 PDZD7Q9H5P4 517 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 SLC45A1Q9Y2W3 748 aa5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 LAS1LQ9Y4W2 734 aaKnown RBP5.24□□□□□ -1.57
HMGCS1-207ENST00000514610 OR6C75A6NL08 312 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 AGAP14A8MT82 685 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 A8MZ25 164 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 BTBD18B2RXH4 712 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 GTPBP1O00178 669 aaKnown RBP5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 AP3D1O14617 1153 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 ASAP2O43150 1006 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 HNRNPCL1O60812 293 aaKnown RBP5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 IGKV2-30P06310 120 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 G6PDP11413 515 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 ZNF182P17025 639 aaPredicted RBP5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 HNRNPH1P31943 449 aaKnown RBP5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 AMTP48728 403 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 PGGT1BP53609 377 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 EIF2S3LQ2VIR3 472 aaKnown RBP5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 C6orf141Q5SZD1 244 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 GKAP1Q5VSY0 366 aaPredicted RBP5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 DAB2IPQ5VWQ8 1189 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 SPATA1Q5VX52 437 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 B3GNT6Q6ZMB0 384 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 PQLC2Q6ZP29 291 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 CLEC17AQ6ZS10 378 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 GSTA5Q7RTV2 222 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 IGSF8Q969P0 613 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 ARHGEF26Q96DR7 871 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 CMTM3Q96MX0 182 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 TMEM47Q9BQJ4 181 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 HAUS8Q9BT25 410 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 RANGRFQ9HD47 186 aaPredicted RBP5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 HINT3Q9NQE9 182 aaKnown RBP5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 CDC14AQ9UNH5 594 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 GPR34Q9UPC5 381 aa5.23□□□□□ -1.57
HMGCS1-207ENST00000514610 A6NCN8 305 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 PTGES3LE9PB15 166 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 VCYO14598 125 aa5.22□□□□□ -1.57
HMGCS1-207ENST00000514610 ZIC3O60481 467 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms