RNA–Protein interactions for RNA: ENST00000513636.1

ATP2C1-220, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-220ENST00000513636 GPATCH4Q5T3I0 446 aaKnown RBP3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 MRNIPQ6NTE8 343 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 ADAM5Q6NVV9 412 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 C8orf82Q6P1X6 216 aaPredicted RBP3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 WDR93Q6P2C0 686 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 ZNF449Q6P9G9 518 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 CPLX2Q6PUV4 134 aaKnown RBP3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 CRTC1Q6UUV9 634 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 TMTC3Q6ZXV5 915 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 ZNF367Q7RTV3 350 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 ERO1BQ86YB8 467 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 PALB2Q86YC2 1186 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 TMTC2Q8N394 836 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 CLIP4Q8N3C7 705 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 RFLNBQ8N5W9 214 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 NECAB1Q8N987 351 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 GMCL1P1Q8NEA9 526 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 ENGASEQ8NFI3 743 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 OPTNQ96CV9 577 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 IQCDQ96DY2 449 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 LRRC46Q96FV0 321 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 ZNF274Q96GC6 653 aaPredicted RBP3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 C12orf42Q96LP6 360 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 ZSCAN31Q96LW9 406 aaPredicted RBP3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 WDR77Q9BQA1 342 aaPredicted RBP3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 SFXN1Q9H9B4 322 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 PNRC2Q9NPJ4 139 aaKnown RBP3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 RNF146Q9NTX7 359 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 RBM28Q9NW13 759 aaKnown RBP3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 IGSF9Q9P2J2 1179 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 CLIP2Q9UDT6 1046 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 ZHX2Q9Y6X8 837 aa3.74□□□□□ -1.81
ATP2C1-220ENST00000513636 FRMPD2Q68DX3 1309 aaPredicted RBP3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 ARID2Q68CP9 1835 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 CCDC196A0A1B0GTZ2 297 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 F5H6K3 240 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 CXCL11O14625 94 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 CPLX1O14810 134 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 DHX16O60231 1041 aaKnown RBP3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 JAK2O60674 1132 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 KCNJ13O60928 360 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 DAOP14920 347 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 IFNAR1P17181 557 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 CHRNB2P17787 502 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 GM2AP17900 193 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 RPL17P18621 184 aaKnown RBP3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 SLC1A4P43007 532 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 GNAQP50148 359 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 STAT2P52630 851 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 PMS2P54278 862 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 POLE2P56282 527 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 SELENOVP59797 346 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 HMGN5P82970 282 aaKnown RBP3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 KLRC3Q07444 240 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 MCL1Q07820 350 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 ZNF543Q08ER8 600 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 SPP2Q13103 211 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 IKQ13123 557 aaPredicted RBP3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 CUL4AQ13619 759 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 PPP2R5BQ15173 497 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 SF3B4Q15427 424 aaKnown RBP eCLIP3.73□□□□□ -1.818e-9■■■■□ 21.6
ATP2C1-220ENST00000513636 FAM83BQ5T0W9 1011 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 CST9Q5W186 159 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 PMS2CLQ68D20 193 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 HIST2H2BCQ6DN03 193 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 EXOC3L1Q86VI1 746 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 SPICE1Q8N0Z3 855 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 DPP10Q8N608 796 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 FAM216AQ8WUB2 273 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 FIZ1Q96SL8 496 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 SPZ1Q9BXG8 430 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 SPRY4Q9C004 299 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 RPAP3Q9H6T3 665 aaPredicted RBP3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 MAD2L2Q9UI95 211 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 ABT1Q9ULW3 272 aaKnown RBP3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 KIF3AQ9Y496 699 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 SNX13Q9Y5W8 968 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 HTTP42858 3142 aa3.73□□□□□ -1.81
ATP2C1-220ENST00000513636 CCL15-CCL14A0A0B4J2E2 113 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 C19orf81C9J6K1 198 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 KLRF2D3W0D1 207 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 CYTH3O43739 400 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 PLA2G6O60733 806 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 FLOT1O75955 427 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 NEURL1O76050 574 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 DEXIO95424 95 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 CTDNEP1O95476 244 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 GOLGA8HP0CJ92 632 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 GJB2P29033 226 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 TUBA1BP68363 451 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 IRX3P78415 501 aaPredicted RBP3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 AKAP17AQ02040 695 aaKnown RBP3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 CDC37Q16543 378 aaPredicted RBP3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 CCL15Q16663 113 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 SLC35G1Q2M3R5 365 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 RGMBQ6NW40 437 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 ERAP2Q6P179 960 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 FAM160B2Q86V87 743 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 SPEM1Q8N4L4 309 aa3.72□□□□□ -1.81
ATP2C1-220ENST00000513636 SRBD1Q8N5C6 995 aaKnown RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms