RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 KRT73Q86Y46 540 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 ZDHHC13Q8IUH4 622 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 TMEM139Q8IV31 216 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 CLYBLQ8N0X4 340 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 SPATA22Q8NHS9 363 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 CLEC4CQ8WTT0 213 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 NMD3Q96D46 503 aaKnown RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 MRPL48Q96GC5 212 aaKnown RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 SLCO1B3Q9NPD5 702 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 ANAPC2Q9UJX6 822 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 FCF1Q9Y324 198 aaKnown RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 CCL22O00626 93 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 AZIN1O14977 448 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 OR10H2O60403 315 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 CHRNB2P17787 502 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 ITPKAP23677 461 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 GRIA3P42263 894 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 RXRGP48443 463 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 SEC13P55735 322 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 ARHGAP1Q07960 439 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 FBXO22Q8NEZ5 403 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 ARNTL2Q8WYA1 636 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 APOL4Q9BPW4 351 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 OXCT2Q9BYC2 517 aaPredicted RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 GBA3Q9H227 469 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 FZD8Q9H461 694 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 ARHGEF4Q9NR80 690 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 PNPOQ9NVS9 261 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 DUS2Q9NX74 493 aaKnown RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 ZMYND8Q9ULU4 1186 aaPredicted RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 MTF2Q9Y483 593 aaPredicted RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 N6AMT1Q9Y5N5 214 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 SLC38A8A6NNN8 435 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 PTGES3LE9PB15 166 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 BIRC5O15392 142 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 ERAL1O75616 437 aaKnown RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 RNASEH2AO75792 299 aaKnown RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 VNN1O95497 513 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 EOMESO95936 686 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 ANXA6P08133 673 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 ATXN1P54253 815 aaKnown RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 C21orf59P57076 290 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 USP4Q13107 963 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 CBX2Q14781 532 aaPredicted RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 GRM3Q14832 879 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 ZNHIT3Q15649 155 aaPredicted RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 NRF1Q16656 503 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 GPAT3Q53EU6 434 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 ZNF618Q5T7W0 954 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 HECTD2Q5U5R9 776 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 COMMD2Q86X83 199 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 REEP1Q9H902 201 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 POLR1DQ9Y2S0 133 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 CPQQ9Y646 472 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 AKAP12Q02952 1782 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 KCNU1A8MYU2 1149 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 NFATC1O95644 943 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 GNA12Q03113 381 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 NEDD8Q15843 81 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 PAGE2Q7Z2X7 111 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 PARGQ86W56 976 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 FNIP1Q8TF40 1166 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 RMND5BQ96G75 393 aaPredicted RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 RHOJQ9H4E5 214 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 CIDEBQ9UHD4 219 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 SALL4Q9UJQ4 1053 aa9.07□□□□□ -0.96
NEK1-207ENST00000511633 LEF1Q9UJU2 399 aaPredicted RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 NOCTQ9UK39 431 aaKnown RBP9.07□□□□□ -0.96
NEK1-207ENST00000511633 BCLAF3A2AJT9 711 aaKnown RBP9.06□□□□□ -0.96
NEK1-207ENST00000511633 HDAC3O15379 428 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 PCCBP05166 539 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 TPSB2P20231 275 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 PAICSP22234 425 aaKnown RBP9.06□□□□□ -0.96
NEK1-207ENST00000511633 PTPN9P43378 593 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 CXCR3P49682 368 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 HK2P52789 917 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 CDH4P55283 916 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 JAG1P78504 1218 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 CYP4F8P98187 520 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 TPSAB1Q15661 275 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 DGKKQ5KSL6 1271 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 SNAP47Q5SQN1 464 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 ZNF549Q6P9A3 640 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 TRABD2AQ86V40 505 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 CCDC103Q8IW40 242 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 POMGNT2Q8NAT1 580 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 CPT1BQ92523 772 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 NELL1Q92832 810 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 GAS2L1Q99501 681 aaPredicted RBP9.06□□□□□ -0.96
NEK1-207ENST00000511633 WRAP53Q9BUR4 548 aaKnown RBP9.06□□□□□ -0.96
NEK1-207ENST00000511633 C9orf16Q9BUW7 83 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 HMGXB4Q9UGU5 601 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 POLR3HQ9Y535 204 aaPredicted RBP9.06□□□□□ -0.96
NEK1-207ENST00000511633 PCDHGC4Q9Y5F7 938 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 KCNE2Q9Y6J6 123 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 CCNCP24863 283 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 PSME3P61289 254 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 RGS1Q08116 209 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 TIGD5Q53EQ6 642 aa9.06□□□□□ -0.96
NEK1-207ENST00000511633 ATAT1Q5SQI0 421 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms