RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 ZNF701M0R085 212 aaPredicted RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 TRIM38O00635 465 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 GRAP2O75791 330 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 KRT34O76011 436 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 CRTAMO95727 393 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 PRKCGP05129 697 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 RHOP08100 348 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 HAPLN1P10915 354 aaPredicted RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 PSMC3P17980 439 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 SLC10A2Q12908 348 aaPredicted RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 APOFQ13790 326 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 TLR1Q15399 786 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 LRRC36Q1X8D7 754 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 ZNF423Q2M1K9 1284 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 SPATS1Q496A3 300 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 PPP1R26Q5T8A7 1209 aaPredicted RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 NAPEPLDQ6IQ20 393 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 PIWIL4Q7Z3Z4 852 aaKnown RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 SATL1Q86VE3 508 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 TMC8Q8IU68 726 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 TERB1Q8NA31 727 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 GOLM1Q8NBJ4 401 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 HM13Q8TCT9 377 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 RNF139Q8WU17 664 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 PTCD2Q8WV60 388 aaKnown RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 MPP4Q96JB8 637 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 GCNAQ96QF7 691 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 MRPL1Q9BYD6 325 aaKnown RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 CASS4Q9NQ75 786 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 SYBUQ9NX95 663 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 TUBA8Q9NY65 449 aaPredicted RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 LIMD1Q9UGP4 676 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 E9PBE3 544 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 PRRG1O14668 218 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 KLHL41O60662 606 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 TFAP2AP05549 437 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 HMGA1P17096 107 aaKnown RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 GPR15P49685 360 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 RGS7P49802 495 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 SMARCB1Q12824 385 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 DCTN2Q13561 401 aaKnown RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 SLC12A1Q13621 1099 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 FSTL4Q6MZW2 842 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 SNX32Q86XE0 403 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 PHTF2Q8N3S3 785 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 PACRGLQ8N7B6 248 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 ZNF781Q8N8C0 355 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 NTAN1Q96AB6 310 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 PCED1BQ96HM7 432 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 TNIP3Q96KP6 325 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 BIRC8Q96P09 236 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 GPR22Q99680 433 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 ACE2Q9BYF1 805 aaPredicted RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 RHOJQ9H4E5 214 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 ZNF385DQ9H6B1 395 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 WDR41Q9HAD4 459 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 ZBTB26Q9HCK0 441 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 C11orf16Q9NQ32 467 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 PTBP2Q9UKA9 531 aaKnown RBP12.92□□□□□ -0.34
HMGB2-205ENST00000511316 CDH9Q9ULB4 789 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 AK5Q9Y6K8 562 aa12.92□□□□□ -0.34
HMGB2-205ENST00000511316 AIM2O14862 343 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 ZBTB14O43829 449 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 LAMP2P13473 410 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 PTPN2P17706 415 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 PTPN1P18031 435 aaKnown RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 TTKP33981 857 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 NOS2P35228 1153 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 COG7P83436 770 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 TXNL4AP83876 142 aaKnown RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 ORC1Q13415 861 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 ELMSAN1Q6PJG2 1045 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 HACD2Q6Y1H2 254 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 RBM44Q6ZP01 1051 aaKnown RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 GAREM2Q75VX8 874 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 DNAJB7Q7Z6W7 309 aaPredicted RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 TMEM150AQ86TG1 271 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 SCUBE3Q8IX30 993 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 DCP1BQ8IZD4 617 aaKnown RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 CEP70Q8NHQ1 597 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 SPPL2BQ8TCT7 592 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 GPR152Q8TDT2 470 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 C2orf15Q8WU43 125 aaKnown RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 FGF13Q92913 245 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 PBXIP1Q96AQ6 731 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 ZNF669Q96BR6 464 aaPredicted RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 CDRT15Q96T59 188 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 RPP25Q9BUL9 199 aaKnown RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 NUF2Q9BZD4 464 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 IL21Q9HBE4 155 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 EML4Q9HC35 981 aaKnown RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 ZNF334Q9HCZ1 680 aaPredicted RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 CHCHD3Q9NX63 227 aaKnown RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 NCKIPSDQ9NZQ3 722 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 KLHL8Q9P2G9 620 aaPredicted RBP12.91□□□□□ -0.34
HMGB2-205ENST00000511316 MUTYHQ9UIF7 546 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 DMDP11532 3685 aa12.91□□□□□ -0.34
HMGB2-205ENST00000511316 ANHXE9PGG2 379 aa12.9□□□□□ -0.34
HMGB2-205ENST00000511316 XPO1O14980 1071 aaKnown RBP12.9□□□□□ -0.34
HMGB2-205ENST00000511316 XYLBO75191 536 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms