RNA–Protein interactions for RNA: ENST00000509468.1

KDM3B-206, Transcript of lysine demethylase 3B, humanhuman

TSL 5

Gene KDM3B, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-206ENST00000509468 SIRPGQ9P1W8 387 aa12.68□□□□□ -0.38
KDM3B-206ENST00000509468 PHTF1Q9UMS5 762 aa12.68□□□□□ -0.38
KDM3B-206ENST00000509468 RP1P56715 2156 aa12.68□□□□□ -0.38
KDM3B-206ENST00000509468 LRP4O75096 1905 aa12.68□□□□□ -0.38
KDM3B-206ENST00000509468 CCDC187A0A096LP49 1063 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 TMEM202A6NGA9 273 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 MYO1FO00160 1098 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 NTN3O00634 580 aaPredicted RBP12.67□□□□□ -0.38
KDM3B-206ENST00000509468 ATXN7O15265 892 aaPredicted RBP12.67□□□□□ -0.38
KDM3B-206ENST00000509468 HTRA2O43464 458 aaPredicted RBP12.67□□□□□ -0.38
KDM3B-206ENST00000509468 MAFKO60675 156 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 CELA2BP08218 269 aaPredicted RBP12.67□□□□□ -0.38
KDM3B-206ENST00000509468 KRT10P13645 584 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 PNLIPP16233 465 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 IL1R2P27930 398 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 UBASH3AP57075 661 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 CXADRP78310 365 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 FANCCQ00597 558 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 EIF3IQ13347 325 aaKnown RBP12.67□□□□□ -0.38
KDM3B-206ENST00000509468 NFKBIBQ15653 356 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 MARC1Q5VT66 337 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 OGFOD3Q6PK18 319 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 TAF8Q7Z7C8 310 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 FAM46DQ8NEK8 389 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 PCDH19Q8TAB3 1148 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 PDCD6IPQ8WUM4 868 aaKnown RBP12.67□□□□□ -0.38
KDM3B-206ENST00000509468 SLC39A7Q92504 469 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 NAF1Q96HR8 494 aaKnown RBP12.67□□□□□ -0.38
KDM3B-206ENST00000509468 CSPG4P5Q96PW8 444 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 GFM1Q96RP9 751 aaKnown RBP12.67□□□□□ -0.38
KDM3B-206ENST00000509468 STRADBQ9C0K7 418 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 PCDHGC4Q9Y5F7 938 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 BPTFQ12830 3046 aa12.67□□□□□ -0.38
KDM3B-206ENST00000509468 COL27A1Q8IZC6 1860 aaPredicted RBP12.67□□□□□ -0.38
KDM3B-206ENST00000509468 ATRXP46100 2492 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 GOLGA6L19H0YKK7 550 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 KLK10O43240 276 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 TNFSF15O95150 251 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 PEX11BO96011 259 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 CYP2A6P11509 494 aaPredicted RBP12.66□□□□□ -0.38
KDM3B-206ENST00000509468 GLB1P16278 677 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 CR2P20023 1033 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 CES1P23141 567 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 VIPR1P32241 457 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 MMP13P45452 471 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 ZBED6P86452 979 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 C19orf57Q0VDD7 668 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 PEX6Q13608 980 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 HADHQ16836 314 aaKnown RBP12.66□□□□□ -0.38
KDM3B-206ENST00000509468 SMTNL2Q2TAL5 461 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 CCDC122Q5T0U0 273 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 HGSNATQ68CP4 663 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 TP53INP2Q8IXH6 220 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 ATPAF2Q8N5M1 289 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 KYQ8NBH2 561 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 GPR156Q8NFN8 814 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 CPLX3Q8WVH0 158 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 OR1E3Q8WZA6 343 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 CCDC74AQ96AQ1 378 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 COQ10AQ96MF6 247 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 TMEM74Q96NL1 305 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 FUCA2Q9BTY2 467 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 LRRN3Q9H3W5 708 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 WDR26Q9H7D7 661 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 SYNDIG1Q9H7V2 258 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 NOD2Q9HC29 1040 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 PHPT1Q9NRX4 125 aaPredicted RBP12.66□□□□□ -0.38
KDM3B-206ENST00000509468 HAUS2Q9NVX0 235 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 RCOR3Q9P2K3 495 aaPredicted RBP12.66□□□□□ -0.38
KDM3B-206ENST00000509468 B4GALT6Q9UBX8 382 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 ANAPC7Q9UJX3 599 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 APPL1Q9UKG1 709 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 CAPN11Q9UMQ6 739 aa12.66□□□□□ -0.38
KDM3B-206ENST00000509468 LUC7L2Q9Y383 392 aaKnown RBP12.66□□□□□ -0.38
KDM3B-206ENST00000509468 CAPN8A6NHC0 703 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 CDRT15L2A8MXV6 281 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 PSMD11O00231 422 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 ZW10O43264 779 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 HEXIM1O94992 359 aaKnown RBP12.65□□□□□ -0.38
KDM3B-206ENST00000509468 CPP00450 1065 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 CYP1A2P05177 515 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 MYCLP1P12525 358 aaPredicted RBP12.65□□□□□ -0.38
KDM3B-206ENST00000509468 SSR1P43307 286 aaKnown RBP12.65□□□□□ -0.38
KDM3B-206ENST00000509468 INHBCP55103 352 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 CCL7P80098 99 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 ARHGEF7Q14155 803 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 KRT81Q14533 505 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 TCEA2Q15560 299 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 ARMC12Q5T9G4 340 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 FOXR1Q6PIV2 292 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 CBARPQ8N350 705 aaPredicted RBP12.65□□□□□ -0.38
KDM3B-206ENST00000509468 PGBD5Q8N414 524 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 FBXO39Q8N4B4 442 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 NUS1Q96E22 293 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 SCRN2Q96FV2 425 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 LIN37Q96GY3 246 aaPredicted RBP12.65□□□□□ -0.38
KDM3B-206ENST00000509468 PRR11Q96HE9 360 aaPredicted RBP12.65□□□□□ -0.38
KDM3B-206ENST00000509468 NSMCE3Q96MG7 304 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 MGME1Q9BQP7 344 aa12.65□□□□□ -0.38
KDM3B-206ENST00000509468 NUP85Q9BW27 656 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms