RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 LRRN4Q8WUT4 740 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 PIH1D2Q8WWB5 315 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 VOPP1Q96AW1 172 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 TADA1Q96BN2 335 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 RTP4Q96DX8 246 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 KLHDC7BQ96G42 594 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 SLC6A18Q96N87 628 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 RUNDC3BQ96NL0 473 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 LYSMD1Q96S90 227 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 TMEM121Q9BTD3 319 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 EDEM2Q9BV94 578 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 CDH19Q9H159 772 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 USP29Q9HBJ7 922 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 TMEM9BQ9NQ34 198 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 GDF3Q9NR23 364 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 TMEM74BQ9NUR3 256 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 HACD3Q9P035 362 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 PAK5Q9P286 719 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 RNF14Q9UBS8 474 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 B4GALT6Q9UBX8 382 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 CDV3Q9UKY7 258 aaKnown RBP9.17□□□□□ -0.94
NUP54-207ENST00000508583 ZFR2Q9UPR6 939 aaKnown RBP9.17□□□□□ -0.94
NUP54-207ENST00000508583 ITM2BQ9Y287 266 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 DRG1Q9Y295 367 aaKnown RBP9.17□□□□□ -0.94
NUP54-207ENST00000508583 ANKRD6Q9Y2G4 727 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 SAR1BQ9Y6B6 198 aa9.17□□□□□ -0.94
NUP54-207ENST00000508583 C1orf232A0A0U1RR37 186 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 TCRBV7S2A1N4TA0A589 114 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 LNP1A1A4G5 178 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 RGSL1A5PLK6 1076 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 USP27XA6NNY8 438 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 KIF2AO00139 706 aaPredicted RBP9.16□□□□□ -0.94
NUP54-207ENST00000508583 AP3B1O00203 1094 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 TLR4O00206 839 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 PDE2AO00408 941 aaPredicted RBP9.16□□□□□ -0.94
NUP54-207ENST00000508583 WNT9AO14904 365 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 SPINT1O43278 529 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 MMP20O60882 483 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 HEXIM1O94992 359 aaKnown RBP9.16□□□□□ -0.94
NUP54-207ENST00000508583 GAS8O95995 478 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 PAK4O96013 591 aaPredicted RBP9.16□□□□□ -0.94
NUP54-207ENST00000508583 MT-CYBP00156 380 aaPredicted RBP9.16□□□□□ -0.94
NUP54-207ENST00000508583 IFNB1P01574 187 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 FGF1P05230 155 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 MMP2P08253 660 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 ENGP17813 658 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 HTR1BP28222 390 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 CD68P34810 354 aaPredicted RBP9.16□□□□□ -0.94
NUP54-207ENST00000508583 PAFAH1B1P43034 410 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 ARRB1P49407 418 aaPredicted RBP9.16□□□□□ -0.94
NUP54-207ENST00000508583 LIMK1P53667 647 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 WNT3AP56704 352 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 YPEL5P62699 121 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 IRX4P78413 519 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 PDE1BQ01064 536 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 RALGDSQ12967 914 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 GRIK2Q13002 908 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 SLC14A1Q13336 389 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 ZDHHC20Q5W0Z9 365 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 B4GALNT4Q76KP1 1039 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 PTAR1Q7Z6K3 402 aaPredicted RBP9.16□□□□□ -0.94
NUP54-207ENST00000508583 ABI3BPQ7Z7G0 1075 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 LINC00523Q86TU6 105 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 ZSWIM9Q86XI8 627 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 KIAA2013Q8IYS2 634 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 IPMKQ8NFU5 416 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 SPATA22Q8NHS9 363 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 CCDC110Q8TBZ0 833 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 C1orf54Q8WWF1 131 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 ATG4AQ8WYN0 398 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 FAM118BQ9BPY3 351 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 ORAI3Q9BRQ5 295 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 LRRC40Q9H9A6 602 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 ERVMER34-1Q9H9K5 563 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 ZFYVE1Q9HBF4 777 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 MAGEE1Q9HCI5 957 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.16□□□□□ -0.94
NUP54-207ENST00000508583 PKD2L2Q9NZM6 624 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 GGT7Q9UJ14 662 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 R3HDM2Q9Y2K5 976 aaKnown RBP9.16□□□□□ -0.94
NUP54-207ENST00000508583 GVINP1Q7Z2Y8 2422 aa9.16□□□□□ -0.94
NUP54-207ENST00000508583 A0A1B0GVT2 93 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 LOC285095A0A1B0GVY8 99 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 NPIPB15A6NHN6 443 aaPredicted RBP9.15□□□□□ -0.94
NUP54-207ENST00000508583 E7EVH7 732 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 PPFIA2O75334 1257 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 RECQL5O94762 991 aaPredicted RBP9.15□□□□□ -0.94
NUP54-207ENST00000508583 PRLP01236 227 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 PDHA1P08559 390 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 ZNF883P0CG24 379 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 THEGLP0DJG4 465 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 TSHRP16473 764 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 CTPS1P17812 591 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 TGM1P22735 817 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 KELP23276 732 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 PSMB4P28070 264 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 CASQ1P31415 396 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 HNF1BP35680 557 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 LMAN1P49257 510 aa9.15□□□□□ -0.94
NUP54-207ENST00000508583 FNTAP49354 379 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms