RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 FOXG1P55316 489 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 NUP107P57740 925 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 AP2B1P63010 937 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 KCNJ2P63252 427 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 RIPPLY1Q0D2K3 151 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 MED21Q13503 144 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 DHX34Q14147 1143 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 KCNJ12Q14500 433 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PPP2R5BQ15173 497 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 KRT31Q15323 416 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 TRIM71Q2Q1W2 868 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 BOLA3Q53S33 107 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 RNASE12Q5GAN4 147 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SLC9C2Q5TAH2 1124 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SNX30Q5VWJ9 437 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 NXNQ6DKJ4 435 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 NEPROQ6NW34 567 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 C1orf228Q6PIY5 440 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SHC4Q6S5L8 630 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PACS1Q6VY07 963 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 LRRC74BQ6ZQY2 392 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 NET1Q7Z628 596 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 CTU1Q7Z7A3 348 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 ADGRG6Q86SQ4 1221 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 LONP2Q86WA8 852 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SFR1Q86XK3 245 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 KRT73Q86Y46 540 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 IZUMO1Q8IYV9 350 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 ZBED8Q8IZ13 594 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 BBS5Q8N3I7 341 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 MIGA1Q8NAN2 632 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 ACTRT1Q8TDG2 376 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 ACMSDQ8TDX5 336 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 TMEM171Q8WVE6 324 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SYN2Q92777 582 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SNF8Q96H20 258 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 MRGPRX1Q96LB2 322 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 BIRC8Q96P09 236 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PRR25Q96S07 402 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 OLFM1Q99784 485 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 FAM118BQ9BPY3 351 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 ELAC2Q9BQ52 826 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 MESP1Q9BRJ9 268 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 TMEM79Q9BSE2 394 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 HAUS8Q9BT25 410 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 OSBPL10Q9BXB5 764 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 IL25Q9H293 177 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PABPC3Q9H361 631 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 RETREG1Q9H6L5 497 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 NHEJ1Q9H9Q4 299 aaPredicted RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PPCSQ9HAB8 311 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 MAGEF1Q9HAY2 307 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PLGRKTQ9HBL7 147 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 PCDH12Q9NPG4 1184 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 HOMER2Q9NSB8 354 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 GID8Q9NWU2 228 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 NMRK1Q9NWW6 199 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 ZDHHC7Q9NXF8 308 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 NKIRAS1Q9NYS0 192 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SEPT10Q9P0V9 454 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 UVRAGQ9P2Y5 699 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 IP6K2Q9UHH9 426 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SCAF8Q9UPN6 1271 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 FAM32AQ9Y421 112 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 SRPRBQ9Y5M8 271 aaKnown RBP4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 NFS1Q9Y697 457 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 MROH7-TTC4A0A0A0MT08 1334 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 MRC1P22897 1456 aa4.69□□□□□ -1.66
PDLIM5-211ENST00000508531 COL6A3P12111 3177 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 TRIOBPQ9H2D6 2365 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 TCRBV5S1A1TA0A578 114 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 MACROD2A1Z1Q3 448 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 TTC34A8MYJ7 566 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 H3BNX3 289 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 FCHO1O14526 889 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 SRGAP2O75044 1071 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 CIB2O75838 187 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 ZBED1O96006 694 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 THP07101 528 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 PF4V1P10720 104 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 CYP2C9P11712 490 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 COPB2P35606 906 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 HALP42357 657 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 MATR3P43243 847 aaKnown RBP eCLIP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 HSPA13P48723 471 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 PCYT1AP49585 367 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 CARSP49589 748 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 DGKEP52429 567 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 SLC18A1P54219 525 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 PRKAG1P54619 331 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 CSE1LP55060 971 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 WNT3P56703 355 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 RAB1AP62820 205 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 NOP14P78316 857 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 IL9RQ01113 521 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 CDR2Q01850 454 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 PPIDQ08752 370 aaKnown RBP4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 GOLGA8FQ08AF8 430 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 GOLGA8DPQ0D2H9 430 aa4.68□□□□□ -1.66
PDLIM5-211ENST00000508531 ITGA7Q13683 1181 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms