RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ING2Q9H160 280 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CCDC86Q9H6F5 360 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CWH43Q9H720 699 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ARHGEF38Q9NXL2 777 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 KIAA1468Q9P260 1216 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ZC3H7BQ9UGR2 993 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 BACE2Q9Y5Z0 518 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ASTN1O14525 1302 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 NCANO14594 1321 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 A0A1W2PP55 124 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 EPOPA6NHQ4 379 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 EFCAB7A8K855 629 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 BIRC5O15392 142 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 RFPL3O75679 317 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 KAT7O95251 611 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ABCA1O95477 2261 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 COX7A2P14406 83 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CDH4P55283 916 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TUBA1BP68363 451 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 GABREP78334 506 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 EFTUD2Q15029 972 aaKnown RBP eCLIP2.97□□□□□ -1.932e-7■■■■□ 21.3
NEDD4-208ENST00000508342 LRRC14Q15048 493 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TRADDQ15628 312 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 KBTBD12Q3ZCT8 623 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 UBXN11Q5T124 520 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PPP1R26Q5T8A7 1209 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ATAD3BQ5T9A4 648 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 LRRC55Q6ZSA7 311 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TUBA1AQ71U36 451 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TICRRQ7Z2Z1 1910 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM69Q86WT6 500 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 FAM46DQ8NEK8 389 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 BTBD6Q96KE9 485 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 S100A13Q99584 98 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 HEPHQ9BQS7 1158 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 B3GNT5Q9BYG0 378 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TM6SF2Q9BZW4 377 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 REXO4Q9GZR2 422 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 AGO3Q9H9G7 860 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 NHEJ1Q9H9Q4 299 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 WWOXQ9NZC7 414 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 SMARCAL1Q9NZC9 954 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 EIF2B4Q9UI10 523 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TRMT6Q9UJA5 497 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 FBXW11Q9UKB1 542 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CNOT6Q9ULM6 557 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 SCML2Q9UQR0 700 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ADGRG1Q9Y653 693 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 EPN1Q9Y6I3 576 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 C2orf78A6NCI8 922 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 USP12O75317 370 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM16O95361 564 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 KRT8P05787 483 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 KLK3P07288 261 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 GLULP15104 373 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CTPS1P17812 591 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 GLDCP23378 1020 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PER3P56645 1201 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 LILRA4P59901 499 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 OC90Q02509 493 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CDK18Q07002 472 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ADCY2Q08462 1091 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PWP1Q13610 501 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 PTK6Q13882 451 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TAF13Q15543 124 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 SMTNL2Q2TAL5 461 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 C3orf38Q5JPI3 329 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CAPRIN2Q6IMN6 1127 aaKnown RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CYP20A1Q6UW02 462 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF677Q86XU0 584 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 DSELQ8IZU8 1212 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 FBXO39Q8N4B4 442 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 SLC44A3Q8N4M1 653 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 FAM160A2Q8N612 972 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 FNIP1Q8TF40 1166 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 FAM172AQ8WUF8 416 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 BSNDQ8WZ55 320 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TMEM74Q96NL1 305 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 SLC29A3Q9BZD2 475 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 MIEF1Q9NQG6 463 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 IMPACTQ9P2X3 320 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 SCML1Q9UN30 329 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 STK38LQ9Y2H1 464 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 N6AMT1Q9Y5N5 214 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 SNX8Q9Y5X2 465 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 RLFQ13129 1914 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 URADA6NGE7 173 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 GOLGA8TH3BQL2 631 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 COPEO14579 308 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 DCLK1O15075 740 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 DUX1O43812 170 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 KERAO60938 352 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TBX10O75333 385 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 CRTAMO95727 393 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 HOXB1P14653 301 aaPredicted RBP2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TACR2P21452 398 aa2.97□□□□□ -1.93
NEDD4-208ENST00000508342 TLX1P31314 330 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms