RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 GOLGA6DP0CG33 693 aa15.04■□□□□ -0
RNF4-210ENST00000508235 CTPS1P17812 591 aa15.04■□□□□ -0
RNF4-210ENST00000508235 RABIFP47224 123 aa15.04■□□□□ -0
RNF4-210ENST00000508235 ACOX1Q15067 660 aa15.04■□□□□ -0
RNF4-210ENST00000508235 KIF19Q2TAC6 998 aa15.04■□□□□ -0
RNF4-210ENST00000508235 P3H1Q32P28 736 aa15.04■□□□□ -0
RNF4-210ENST00000508235 STPG1Q5TH74 334 aa15.04■□□□□ -0
RNF4-210ENST00000508235 DRICH1Q6PGQ1 229 aaPredicted RBP15.04■□□□□ -0
RNF4-210ENST00000508235 GCNT7Q6ZNI0 430 aa15.04■□□□□ -0
RNF4-210ENST00000508235 ARHGEF18Q6ZSZ5 1173 aa15.04■□□□□ -0
RNF4-210ENST00000508235 SPATA22Q8NHS9 363 aa15.04■□□□□ -0
RNF4-210ENST00000508235 LYSMD1Q96S90 227 aa15.04■□□□□ -0
RNF4-210ENST00000508235 TMEM121Q9BTD3 319 aa15.04■□□□□ -0
RNF4-210ENST00000508235 FSD1LQ9BXM9 530 aa15.04■□□□□ -0
RNF4-210ENST00000508235 ERVMER34-1Q9H9K5 563 aa15.04■□□□□ -0
RNF4-210ENST00000508235 FZD3Q9NPG1 666 aa15.04■□□□□ -0
RNF4-210ENST00000508235 FSCN3Q9NQT6 498 aa15.04■□□□□ -0
RNF4-210ENST00000508235 GDF3Q9NR23 364 aa15.04■□□□□ -0
RNF4-210ENST00000508235 KCND1Q9NSA2 647 aa15.04■□□□□ -0
RNF4-210ENST00000508235 RXFP3Q9NSD7 469 aa15.04■□□□□ -0
RNF4-210ENST00000508235 GOLGA6AQ9NYA3 693 aa15.04■□□□□ -0
RNF4-210ENST00000508235 ZNF148Q9UQR1 794 aa15.04■□□□□ -0
RNF4-210ENST00000508235 TMEM131Q92545 1883 aa15.03■□□□□ -0
RNF4-210ENST00000508235 RIF1Q5UIP0 2472 aaKnown RBP15.03■□□□□ -0
RNF4-210ENST00000508235 A8MX80 341 aa15.03■□□□□ -0
RNF4-210ENST00000508235 CES2O00748 559 aa15.03■□□□□ -0
RNF4-210ENST00000508235 CDX4O14627 284 aaPredicted RBP15.03■□□□□ -0
RNF4-210ENST00000508235 RAD51BO15315 384 aa15.03■□□□□ -0
RNF4-210ENST00000508235 YKT6O15498 198 aa15.03■□□□□ -0
RNF4-210ENST00000508235 GDF9O60383 454 aa15.03■□□□□ -0
RNF4-210ENST00000508235 RECQL5O94762 991 aaPredicted RBP15.03■□□□□ -0
RNF4-210ENST00000508235 NDST3O95803 873 aa15.03■□□□□ -0
RNF4-210ENST00000508235 WNT1P04628 370 aa15.03■□□□□ -0
RNF4-210ENST00000508235 ITGAVP06756 1048 aa15.03■□□□□ -0
RNF4-210ENST00000508235 ALPIP09923 528 aa15.03■□□□□ -0
RNF4-210ENST00000508235 ZNF883P0CG24 379 aa15.03■□□□□ -0
RNF4-210ENST00000508235 THEGLP0DJG4 465 aa15.03■□□□□ -0
RNF4-210ENST00000508235 HNF1BP35680 557 aa15.03■□□□□ -0
RNF4-210ENST00000508235 CTSKP43235 329 aa15.03■□□□□ -0
RNF4-210ENST00000508235 ARRB1P49407 418 aaPredicted RBP15.03■□□□□ -0
RNF4-210ENST00000508235 WNT3AP56704 352 aa15.03■□□□□ -0
RNF4-210ENST00000508235 NXPH1P58417 271 aa15.03■□□□□ -0
RNF4-210ENST00000508235 GNG11P61952 73 aa15.03■□□□□ -0
RNF4-210ENST00000508235 YPEL5P62699 121 aa15.03■□□□□ -0
RNF4-210ENST00000508235 SEMG2Q02383 582 aa15.03■□□□□ -0
RNF4-210ENST00000508235 SLC14A1Q13336 389 aa15.03■□□□□ -0
RNF4-210ENST00000508235 PTK2BQ14289 1009 aa15.03■□□□□ -0
RNF4-210ENST00000508235 CNGA3Q16281 694 aa15.03■□□□□ -0
RNF4-210ENST00000508235 HLA-BQ31612 363 aa15.03■□□□□ -0
RNF4-210ENST00000508235 LAYNQ6UX15 382 aa15.03■□□□□ -0
RNF4-210ENST00000508235 Q6ZSR6 202 aa15.03■□□□□ -0
RNF4-210ENST00000508235 FAM71DQ8N9W8 422 aa15.03■□□□□ -0
RNF4-210ENST00000508235 TP53I13Q8NBR0 393 aaPredicted RBP15.03■□□□□ -0
RNF4-210ENST00000508235 CCDC110Q8TBZ0 833 aa15.03■□□□□ -0
RNF4-210ENST00000508235 CCHCR1Q8TD31 782 aa15.03■□□□□ -0
RNF4-210ENST00000508235 ATG4AQ8WYN0 398 aa15.03■□□□□ -0
RNF4-210ENST00000508235 TRIB3Q96RU7 358 aa15.03■□□□□ -0
RNF4-210ENST00000508235 GAREM1Q9H706 876 aa15.03■□□□□ -0
RNF4-210ENST00000508235 DNAAF2Q9NVR5 837 aaKnown RBP15.03■□□□□ -0
RNF4-210ENST00000508235 UBP1Q9NZI7 540 aa15.03■□□□□ -0
RNF4-210ENST00000508235 TTC7AQ9ULT0 858 aaPredicted RBP15.03■□□□□ -0
RNF4-210ENST00000508235 COQ6Q9Y2Z9 468 aa15.03■□□□□ -0
RNF4-210ENST00000508235 SNX11Q9Y5W9 270 aa15.03■□□□□ -0
RNF4-210ENST00000508235 EP300Q09472 2414 aaPredicted RBP15.02■□□□□ -0
RNF4-210ENST00000508235 PTPRZ1P23471 2315 aaPredicted RBP15.02■□□□□ -0
RNF4-210ENST00000508235 LOC285095A0A1B0GVY8 99 aa15.02■□□□□ -0
RNF4-210ENST00000508235 SLC30A4O14863 429 aa15.02■□□□□ -0
RNF4-210ENST00000508235 GCATO75600 419 aa15.02■□□□□ -0
RNF4-210ENST00000508235 ATP1A1P05023 1023 aaKnown RBP15.02■□□□□ -0
RNF4-210ENST00000508235 TCP1P17987 556 aaKnown RBP15.02■□□□□ -0
RNF4-210ENST00000508235 HLA-DPA1P20036 260 aa15.02■□□□□ -0
RNF4-210ENST00000508235 LHCGRP22888 699 aa15.02■□□□□ -0
RNF4-210ENST00000508235 CLDN2P57739 230 aa15.02■□□□□ -0
RNF4-210ENST00000508235 PFN3P60673 137 aa15.02■□□□□ -0
RNF4-210ENST00000508235 BNC1Q01954 994 aa15.02■□□□□ -0
RNF4-210ENST00000508235 GALNT3Q14435 633 aa15.02■□□□□ -0
RNF4-210ENST00000508235 IRF4Q15306 451 aa15.02■□□□□ -0
RNF4-210ENST00000508235 OASLQ15646 514 aaKnown RBP15.02■□□□□ -0
RNF4-210ENST00000508235 QPCTQ16769 361 aa15.02■□□□□ -0
RNF4-210ENST00000508235 PARP6Q2NL67 630 aa15.02■□□□□ -0
RNF4-210ENST00000508235 LRRC66Q68CR7 880 aa15.02■□□□□ -0
RNF4-210ENST00000508235 DENND2CQ68D51 928 aa15.02■□□□□ -0
RNF4-210ENST00000508235 CRTC1Q6UUV9 634 aa15.02■□□□□ -0
RNF4-210ENST00000508235 KDELC1Q6UW63 502 aa15.02■□□□□ -0
RNF4-210ENST00000508235 KDELC2Q7Z4H8 507 aa15.02■□□□□ -0
RNF4-210ENST00000508235 PTAR1Q7Z6K3 402 aaPredicted RBP15.02■□□□□ -0
RNF4-210ENST00000508235 RASGEF1CQ8N431 466 aa15.02■□□□□ -0
RNF4-210ENST00000508235 C1orf54Q8WWF1 131 aa15.02■□□□□ -0
RNF4-210ENST00000508235 RTP4Q96DX8 246 aa15.02■□□□□ -0
RNF4-210ENST00000508235 NUS1Q96E22 293 aa15.02■□□□□ -0
RNF4-210ENST00000508235 BMFQ96LC9 184 aa15.02■□□□□ -0
RNF4-210ENST00000508235 COQ10AQ96MF6 247 aa15.02■□□□□ -0
RNF4-210ENST00000508235 OSBPL9Q96SU4 736 aa15.02■□□□□ -0
RNF4-210ENST00000508235 RTKNQ9BST9 563 aa15.02■□□□□ -0
RNF4-210ENST00000508235 MAGEE1Q9HCI5 957 aa15.02■□□□□ -0
RNF4-210ENST00000508235 SNX12Q9UMY4 172 aa15.02■□□□□ -0
RNF4-210ENST00000508235 DRG1Q9Y295 367 aaKnown RBP15.02■□□□□ -0
RNF4-210ENST00000508235 CA5BQ9Y2D0 317 aa15.02■□□□□ -0
RNF4-210ENST00000508235 C1orf232A0A0U1RR37 186 aa15.01□□□□□ -0.01
RNF4-210ENST00000508235 POM121BA6NF01 834 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms