RNA–Protein interactions for RNA: ENST00000507784.5

RNF4-209, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-209ENST00000507784 SCRN2Q96FV2 425 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 RSPH9Q9H1X1 276 aaPredicted RBP17.51■□□□□ 0.39
RNF4-209ENST00000507784 TRABDQ9H4I3 376 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 PLAC1Q9HBJ0 212 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 BPIFA1Q9NP55 256 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 LTB4R2Q9NPC1 389 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 C20orf96Q9NUD7 363 aaPredicted RBP17.51■□□□□ 0.39
RNF4-209ENST00000507784 RABGEF1Q9UJ41 708 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 PPIL1Q9Y3C6 166 aa17.51■□□□□ 0.39
RNF4-209ENST00000507784 MTF2Q9Y483 593 aaPredicted RBP17.51■□□□□ 0.39
RNF4-209ENST00000507784 EXOC1LA0A1B0GW35 172 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 TCRBV9S1A1TA0A576 114 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 KANSL1LA0AUZ9 987 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 TLDC2A0PJX2 215 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 MROH6A6NGR9 719 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 NPIPB15A6NHN6 443 aaPredicted RBP17.5■□□□□ 0.39
RNF4-209ENST00000507784 SMIM23A6NLE4 172 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 CCL22O00626 93 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 MAP2K7O14733 419 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 MID1O15344 667 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 STX7O15400 261 aaKnown RBP17.5■□□□□ 0.39
RNF4-209ENST00000507784 ATP8B1O43520 1251 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 SASH3O75995 380 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 CLDN7O95471 211 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 NUDT17P0C025 328 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 VIPR1P32241 457 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 PDE1BQ01064 536 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 ARHGEF7Q14155 803 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 CST6Q15828 149 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 LONRF1Q17RB8 773 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 KLHL38Q2WGJ6 581 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 HSF5Q4G112 596 aaPredicted RBP17.5■□□□□ 0.39
RNF4-209ENST00000507784 ARMC3Q5W041 872 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 ERAP2Q6P179 960 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 TRMT10BQ6PF06 316 aaKnown RBP17.5■□□□□ 0.39
RNF4-209ENST00000507784 CRTC1Q6UUV9 634 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 LRIG3Q6UXM1 1119 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 RASSF3Q86WH2 238 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 CTAGE3PQ8IX95 158 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 UNC5BQ8IZJ1 945 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 TTC30BQ8N4P2 665 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 FLCNQ8NFG4 579 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 OR4K2Q8NGD2 314 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 OR13C4Q8NGS5 318 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 DNAJC1Q96KC8 554 aaKnown RBP17.5■□□□□ 0.39
RNF4-209ENST00000507784 NELL2Q99435 816 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 FOXQ1Q9C009 403 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 VIPAS39Q9H9C1 493 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 ZFYVE1Q9HBF4 777 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 PCDH12Q9NPG4 1184 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 IL1RAPL1Q9NZN1 696 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 B4GALT6Q9UBX8 382 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 MMP17Q9ULZ9 603 aa17.5■□□□□ 0.39
RNF4-209ENST00000507784 ZCWPW2A0A1B0GU75 182 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 GOLGA8CPA6NN73 597 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 VAPBO95292 243 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 PAPSS2O95340 614 aaPredicted RBP17.49■□□□□ 0.39
RNF4-209ENST00000507784 ADH1BP00325 375 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 DNTTP04053 509 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 ERVK-10P10266 1014 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 NEK3P51956 506 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 EIF3BP55884 814 aaKnown RBP17.49■□□□□ 0.39
RNF4-209ENST00000507784 RPS14P62263 151 aaKnown RBP17.49■□□□□ 0.39
RNF4-209ENST00000507784 PRAMEP78395 509 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 MGAT5Q09328 741 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 THOC5Q13769 683 aaKnown RBP17.49■□□□□ 0.39
RNF4-209ENST00000507784 EFTUD2Q15029 972 aaKnown RBP eCLIP17.49■□□□□ 0.391e-6■■■■□ 21
RNF4-209ENST00000507784 CEP85LQ5SZL2 805 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.49■□□□□ 0.39
RNF4-209ENST00000507784 Q6ZS52 159 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 ERN2Q76MJ5 926 aaKnown RBP17.49■□□□□ 0.39
RNF4-209ENST00000507784 TSPAN33Q86UF1 283 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 HDDC3Q8N4P3 179 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 OTUD6BQ8N6M0 293 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 PPM1NQ8N819 430 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 OR6P1Q8NGX9 317 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 CDKL2Q92772 493 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 HDAC10Q969S8 669 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 PBXIP1Q96AQ6 731 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 CERS2Q96G23 380 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 CYTH2Q99418 400 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 SLC6A17Q9H1V8 727 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 ACSS3Q9H6R3 686 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 TBC1D17Q9HA65 648 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 FBRSQ9HAH7 460 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 CD320Q9NPF0 282 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 TREX1Q9NSU2 369 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 NLE1Q9NVX2 485 aaPredicted RBP17.49■□□□□ 0.39
RNF4-209ENST00000507784 POLR3BQ9NW08 1133 aaPredicted RBP17.49■□□□□ 0.39
RNF4-209ENST00000507784 FNDC3AQ9Y2H6 1198 aaKnown RBP17.49■□□□□ 0.39
RNF4-209ENST00000507784 PKP3Q9Y446 797 aa17.49■□□□□ 0.39
RNF4-209ENST00000507784 A0A1W2PQF6 199 aa17.48■□□□□ 0.39
RNF4-209ENST00000507784 GOLGA8KD6RF30 607 aa17.48■□□□□ 0.39
RNF4-209ENST00000507784 GOLGA8TH3BQL2 631 aa17.48■□□□□ 0.39
RNF4-209ENST00000507784 RPP40O75818 363 aaKnown RBP17.48■□□□□ 0.39
RNF4-209ENST00000507784 PIAS1O75925 651 aa17.48■□□□□ 0.39
RNF4-209ENST00000507784 IVLP07476 585 aa17.48■□□□□ 0.39
RNF4-209ENST00000507784 C5AR1P21730 350 aa17.48■□□□□ 0.39
RNF4-209ENST00000507784 SLCO1A2P46721 670 aa17.48■□□□□ 0.39
RNF4-209ENST00000507784 COPAP53621 1224 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms