RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 JAMLQ86YT9 394 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 C1orf216Q8TAB5 229 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 CXorf40AQ8TE69 158 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 LOXL4Q96JB6 756 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 HSPA12BQ96MM6 686 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 SRPK1Q96SB4 655 aaKnown RBP12.88□□□□□ -0.35
TCOF1-210ENST00000506767 WRAP53Q9BUR4 548 aaKnown RBP12.88□□□□□ -0.35
TCOF1-210ENST00000506767 SLC17A9Q9BYT1 436 aa12.88□□□□□ -0.35
TCOF1-210ENST00000506767 A0A0U1RQS6 177 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 A0A1W2PPC4 97 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 IGLON5A6NGN9 336 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 A8MX80 341 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 PROB1E7EW31 1015 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 TTI1O43156 1089 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 USP12O75317 370 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 TM7SF2O76062 418 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 C6P13671 934 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 TPSB2P20231 275 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 IVDP26440 423 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 NUDT1P36639 197 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 DHPSP49366 369 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-210ENST00000506767 BASP1P80723 227 aaKnown RBP12.87□□□□□ -0.35
TCOF1-210ENST00000506767 PTSQ03393 145 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 KCNJ11Q14654 390 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 PPP1R7Q15435 360 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 TPSAB1Q15661 275 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 SYCP2LQ5T4T6 812 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 LRRC66Q68CR7 880 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 PRR23BQ6ZRT6 265 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 LINC00523Q86TU6 105 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 TSPAN33Q86UF1 283 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 RAVER1Q8IY67 606 aaKnown RBP12.87□□□□□ -0.35
TCOF1-210ENST00000506767 SLC25A41Q8N5S1 370 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 CCHCR1Q8TD31 782 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 LRRC45Q96CN5 670 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 EID2BQ96D98 161 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 COQ10AQ96MF6 247 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 LENG8Q96PV6 779 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-210ENST00000506767 APOL2Q9BQE5 337 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 SPO11Q9Y5K1 396 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 DOCK9Q9BZ29 2069 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 PLXNA2O75051 1894 aa12.87□□□□□ -0.35
TCOF1-210ENST00000506767 TRPM6Q9BX84 2022 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 TCRBV7S3A2A0A539 114 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 MEI4A8MW99 385 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 E7EVH7 732 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 EPN2O95208 641 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 CLDN7O95471 211 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-210ENST00000506767 APRTP07741 180 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 C1SP09871 688 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 ELFN1P0C7U0 828 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 ITPKAP23677 461 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 CD27P26842 260 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 MAOBP27338 520 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 MAT2AP31153 395 aaKnown RBP12.86□□□□□ -0.35
TCOF1-210ENST00000506767 GRIA1P42261 906 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 TNNT3P45378 269 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-210ENST00000506767 VPS41P49754 854 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 STC1P52823 247 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 CDK16Q00536 496 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 ARHGEF7Q14155 803 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 SETMARQ53H47 684 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-210ENST00000506767 WDR45BQ5MNZ6 344 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 LYSMD4Q5XG99 296 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 LAIR1Q6GTX8 287 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 ARMCX6Q7L4S7 300 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 HSD11B1LQ7Z5J1 315 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 TMC3Q7Z5M5 1100 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 TECPR1Q7Z6L1 1165 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 CPT1BQ92523 772 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 KLK6Q92876 244 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 CENPTQ96BT3 561 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 KLF6Q99612 283 aaPredicted RBP12.86□□□□□ -0.35
TCOF1-210ENST00000506767 TRABDQ9H4I3 376 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 CASS4Q9NQ75 786 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 HACD3Q9P035 362 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 EIF2B4Q9UI10 523 aaKnown RBP12.86□□□□□ -0.35
TCOF1-210ENST00000506767 PILRBQ9UKJ0 227 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 SMG5Q9UPR3 1016 aaKnown RBP12.86□□□□□ -0.35
TCOF1-210ENST00000506767 DMTF1Q9Y222 760 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 COQ6Q9Y2Z9 468 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 ZNF711Q9Y462 761 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 SPAG17Q6Q759 2223 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 USP34Q70CQ2 3546 aa12.86□□□□□ -0.35
TCOF1-210ENST00000506767 C1orf232A0A0U1RR37 186 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 FAM187AA6NFU0 413 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 DNALI1O14645 258 aaPredicted RBP12.85□□□□□ -0.35
TCOF1-210ENST00000506767 AURKAO14965 403 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 RAD51CO43502 376 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 PIRTP0C851 137 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 ADCY8P40145 1251 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 LMAN1P49257 510 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 CDH17Q12864 832 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 SGCGQ13326 291 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 LPAL2Q16609 132 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 ANKRD22Q5VYY1 191 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 ZNF534Q76KX8 674 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 LYSMD3Q7Z3D4 306 aa12.85□□□□□ -0.35
TCOF1-210ENST00000506767 CYP2U1Q7Z449 544 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms