RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TKTP29401 623 aaKnown RBP15.94■□□□□ 0.14
SCLT1-208ENST00000506368 ILF2Q12905 390 aaKnown RBP15.94■□□□□ 0.14
SCLT1-208ENST00000506368 MAPRE1Q15691 268 aaKnown RBP15.94■□□□□ 0.14
SCLT1-208ENST00000506368 GOLGA7BQ2TAP0 167 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 NOL9Q5SY16 702 aaKnown RBP15.94■□□□□ 0.14
SCLT1-208ENST00000506368 FAM160B1Q5W0V3 765 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 TTC23Q5W5X9 447 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 KCTD11Q693B1 232 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 PRR23CQ6ZRP0 262 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 KIAA0408Q6ZU52 694 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 SPPL2CQ8IUH8 684 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 FKBP10Q96AY3 582 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 MFSD3Q96ES6 412 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 ASB2Q96Q27 587 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 LHPPQ9H008 270 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 POMKQ9H5K3 350 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 KLHL8Q9P2G9 620 aaPredicted RBP15.94■□□□□ 0.14
SCLT1-208ENST00000506368 ANAPC2Q9UJX6 822 aa15.94■□□□□ 0.14
SCLT1-208ENST00000506368 ANGPT2O15123 496 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 MGEA5O60502 916 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 MYO1DO94832 1006 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 ITIH1P19827 911 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 NDST1P52848 882 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 PLA2G16P53816 162 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 GJA9P57773 515 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 TNFAIP2Q03169 654 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 ORC1Q13415 861 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 DGUOKQ16854 277 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 INTS6LQ5JSJ4 861 aaKnown RBP15.93■□□□□ 0.14
SCLT1-208ENST00000506368 TSTD2Q5T7W7 516 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 ATF7IP2Q5U623 682 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 RGMBQ6NW40 437 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 CNSTQ6PJW8 725 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 CRTC3Q6UUV7 619 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 AGMOQ6ZNB7 445 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 LARP4Q71RC2 724 aaKnown RBP eCLIP15.93■□□□□ 0.149e-7■■■■■ 29.6
SCLT1-208ENST00000506368 THAP5Q7Z6K1 395 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 NT5DC4Q86YG4 428 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 OFCC1Q8IZS5 231 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 CHAC2Q8WUX2 184 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 SLC35F5Q8WV83 523 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 AURKBQ96GD4 344 aaPredicted RBP15.93■□□□□ 0.14
SCLT1-208ENST00000506368 NECTIN3Q9NQS3 549 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 PIH1D1Q9NWS0 290 aaKnown RBP15.93■□□□□ 0.14
SCLT1-208ENST00000506368 MTRRQ9UBK8 725 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 HES2Q9Y543 173 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 BCAS1O75363 584 aaPredicted RBP15.93■□□□□ 0.14
SCLT1-208ENST00000506368 KATNA1O75449 491 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 MATN4O95460 622 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 ITGB3P05106 788 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 GOT1P17174 413 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 CRHBPP24387 322 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 SERPINB1P30740 379 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 GLRBP48167 497 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 IGBP1P78318 339 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 FAM182AQ5T1J6 154 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 NAPEPLDQ6IQ20 393 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 CUZD1Q86UP6 607 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 RASAL3Q86YV0 1011 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 BPIFB6Q8NFQ5 453 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 MAGEE2Q8TD90 523 aaPredicted RBP15.93■□□□□ 0.14
SCLT1-208ENST00000506368 KIFC1Q9BW19 673 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 SETD4Q9NVD3 440 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 FZD10Q9ULW2 581 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 TNFSF13BQ9Y275 285 aa15.93■□□□□ 0.14
SCLT1-208ENST00000506368 TMEM233B4DJY2 109 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 ARPC2O15144 300 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 NUAK1O60285 661 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 SYNCRIPO60506 623 aaKnown RBP15.92■□□□□ 0.14
SCLT1-208ENST00000506368 RBP1P09455 135 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 CYP3A5P20815 502 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 ALDH3A2P51648 485 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 RAD23AP54725 363 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 SP4Q02446 784 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 CDH17Q12864 832 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 CRY1Q16526 586 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 CYP51A1Q16850 503 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 Q3C1V9 767 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 PMF1Q6P1K2 205 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 PROSER1Q86XN7 944 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 CCDC117Q8IWD4 279 aaPredicted RBP15.92■□□□□ 0.14
SCLT1-208ENST00000506368 SPARTQ8N0X7 666 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 MUL1Q969V5 352 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 HPDLQ96IR7 371 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 MAGED2Q9UNF1 606 aaPredicted RBP15.92■□□□□ 0.14
SCLT1-208ENST00000506368 SNX5Q9Y5X3 404 aa15.92■□□□□ 0.14
SCLT1-208ENST00000506368 FAM149AA5PLN7 773 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 UBXN8O00124 270 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 TULP3O75386 442 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 IPO13O94829 963 aaKnown RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 PARNO95453 639 aaKnown RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 CYP2B6P20813 491 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 GPX3P22352 226 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 POLR2IP36954 125 aaKnown RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 ACADSBP45954 432 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 KPNA1P52294 538 aaPredicted RBP15.91■□□□□ 0.14
SCLT1-208ENST00000506368 MLLT10P55197 1068 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 PRPSAP1Q14558 356 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 FAM83EQ2M2I3 478 aa15.91■□□□□ 0.14
SCLT1-208ENST00000506368 ZNF484Q5JVG2 852 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms