RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SEPT14Q6ZU15 432 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 RAPH1Q70E73 1250 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 ERN2Q76MJ5 926 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 RHOUQ7L0Q8 258 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 CYB5R4Q7L1T6 521 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 TMC8Q8IU68 726 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 VRK3Q8IV63 474 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 ZBTB8BQ8NAP8 495 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 TSPAN14Q8NG11 270 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 ACTRT2Q8TDY3 377 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 NTN5Q8WTR8 489 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 PIGKQ92643 395 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 PTERQ96BW5 349 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 ZC3HAV1LQ96H79 300 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 HARBI1Q96MB7 349 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 CCDC43Q96MW1 224 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 FNBP1Q96RU3 617 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 NAA11Q9BSU3 229 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 DNAI2Q9GZS0 605 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 ANKRD2Q9GZV1 360 aa3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 COPS7BQ9H9Q2 264 aaPredicted RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 PAPOLBQ9NRJ5 636 aaKnown RBP3.99□□□□□ -1.77
TRAPPC13-208ENST00000505553 A0A096LPK6 155 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 TCRBV5S1A1TA0A578 114 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 CHL1O00533 1208 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 SLC25A17O43808 307 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 ZC3H11AO75152 810 aaKnown RBP eCLIP3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 RECQL5O94762 991 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 MTA2O94776 668 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 TMCC1O94876 653 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 HIST1H2ABP04908 130 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 PTMAP06454 111 aaKnown RBP3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 HIST1H2ADP20671 130 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 ITGAXP20702 1163 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 DRD4P21917 467 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 PROZP22891 400 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 TACR3P29371 465 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 RYKP34925 604 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 MATR3P43243 847 aaKnown RBP eCLIP3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 GPR12P47775 334 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 AVPR1BP47901 424 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 MMP14P50281 582 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 CCR3P51677 355 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 CLDN2P57739 230 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 SLC18A2Q05940 514 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 DDR1Q08345 913 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 MTA1Q13330 715 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 STRIP1Q5VSL9 837 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 TBC1D9BQ66K14 1250 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 NCAPH2Q6IBW4 605 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 RBM44Q6ZP01 1051 aaKnown RBP3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 HIST3H2AQ7L7L0 130 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 GLRX5Q86SX6 157 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 ADGRG3Q86Y34 549 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 LURAP1LQ8IV03 231 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 ARID3BQ8IVW6 561 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 CADM3Q8N126 398 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 CARNMT1Q8N4J0 409 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 SLC44A3Q8N4M1 653 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 OR4N2Q8NGD1 307 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 MRPS27Q92552 414 aaKnown RBP3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 FER1L6-AS2Q96M78 137 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 COQ10AQ96MF6 247 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 TMEM47Q9BQJ4 181 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 SLC25A23Q9BV35 468 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 MLST8Q9BVC4 326 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 FRMD8Q9BZ67 464 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 ACTR5Q9H9F9 607 aaPredicted RBP3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 CYP4F11Q9HBI6 524 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 GDE1Q9NZC3 331 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 COPG2Q9UBF2 871 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 ST3GAL5Q9UNP4 418 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 KNSTRNQ9Y448 316 aa3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 LSM4Q9Y4Z0 139 aaKnown RBP3.98□□□□□ -1.77
TRAPPC13-208ENST00000505553 LOC102723996A0A087X1L8 192 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 GPR75-ASB3A0A0A6YYF3 556 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 C17orf102A2RUQ5 167 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 CXorf65A6NEN9 183 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 POC1B-GALNT4F8VUJ3 575 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 IPO8O15397 1037 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 STX6O43752 255 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 SYNCRIPO60506 623 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 CD63P08962 238 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 STMN1P16949 149 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 EDN2P20800 178 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 RAB28P51157 221 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 UBXN1Q04323 297 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 SCN1BQ07699 218 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 TNIP1Q15025 636 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 E2F5Q15329 346 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 LETM2Q2VYF4 491 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 AAGABQ6PD74 315 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 IYDQ6PHW0 289 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 LRIG3Q6UXM1 1119 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 RBPMS2Q6ZRY4 209 aaKnown RBP3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 TFAP2DQ7Z6R9 452 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 CCDC25Q86WR0 208 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 CCDC170Q8IYT3 715 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 NDUFAF2Q8N183 169 aa3.97□□□□□ -1.77
TRAPPC13-208ENST00000505553 GUF1Q8N442 669 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms