RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 HS3ST2Q9Y278 367 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 CFAP69A5D8W1 941 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 C10orf142B7Z368 130 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 C1QTNF3-AMACRE9PGA6 284 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 SMAPO00193 183 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 RASGRF2O14827 1237 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 PLRG1O43660 514 aaKnown RBP17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 ZFXP17010 805 aaPredicted RBP17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 HPDP32754 393 aaPredicted RBP17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 GRK6P43250 576 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 MAGOHP61326 146 aaKnown RBP17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 GNGT1P63211 74 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 KYNUQ16719 465 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 FAM46CQ5VWP2 391 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 DARS2Q6PI48 645 aaKnown RBP17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 PPIL6Q8IXY8 311 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 FAM71DQ8N9W8 422 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 OR2A12Q8NGT7 310 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 EPS8L3Q8TE67 593 aaKnown RBP17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 C1orf74Q96LT6 269 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 ELF4Q99607 663 aaPredicted RBP17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 CDC6Q99741 560 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 SPON2Q9BUD6 331 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 PHACTR1Q9C0D0 580 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 FZD10Q9ULW2 581 aa17.25■□□□□ 0.35
AP004609.1-201ENST00000498872 CHD6Q8TD26 2715 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 IGLV3-10A0A075B6K4 115 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 A0A1B0GTQ1 180 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 A0A1W2PR77 199 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 FAM221BA6H8Z2 402 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 ERICH4A6NGS2 130 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 H7C0C1 242 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 CBX4O00257 560 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 KPNA3O00505 521 aaPredicted RBP17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 RGS16O15492 202 aaPredicted RBP17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 PCDHGA12O60330 932 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 AGTP01019 485 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 ABHD2P08910 425 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 MAGEA4P43358 317 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 ATP5OP48047 213 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 VASPP50552 380 aaPredicted RBP17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 PPP2R2AP63151 447 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 SETD3Q86TU7 594 aaPredicted RBP17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 ZC3H18Q86VM9 953 aaKnown RBP17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 CHST14Q8NCH0 376 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 GRIN3AQ8TCU5 1115 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 CPT1BQ92523 772 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 FAM131CQ96AQ9 280 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 SKA1Q96BD8 255 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 TTC25Q96NG3 672 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 MYOCQ99972 504 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 MAGEB5Q9BZ81 275 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 STMN4Q9H169 189 aaPredicted RBP17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 SAYSD1Q9NPB0 183 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 RCOR3Q9P2K3 495 aaPredicted RBP17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 CA5BQ9Y2D0 317 aa17.24■□□□□ 0.35
AP004609.1-201ENST00000498872 TLDC2A0PJX2 215 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 TMEM8BA6NDV4 472 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 SRRM3A6NNA2 597 aaPredicted RBP17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 EIF3HO15372 352 aaKnown RBP eCLIP17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 LATO43561 262 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 TCEA3O75764 348 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 TAS2R38P59533 333 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 SHBQ15464 509 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 TNFAIP8L3Q5GJ75 292 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 NAT8LQ8N9F0 302 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 DCAF4L2Q8NA75 395 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 KLK6Q92876 244 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 RTP4Q96DX8 246 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 CSPG4P5Q96PW8 444 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 ZYG11BQ9C0D3 744 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 ACTL7AQ9Y615 435 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 CELSR3Q9NYQ7 3312 aa17.23■□□□□ 0.35
AP004609.1-201ENST00000498872 SMIM23A6NLE4 172 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 TLR4O00206 839 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 ALOX15BO15296 676 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 MDH1P40925 334 aaKnown RBP17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 PIP5KL1Q5T9C9 394 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 NAPEPLDQ6IQ20 393 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 C22orf39Q6P5X5 142 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 CENPUQ71F23 418 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 PRPF39Q86UA1 669 aaKnown RBP17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 CDKL3Q8IVW4 592 aaPredicted RBP17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 ARRDC3Q96B67 414 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 C9orf72Q96LT7 481 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 SERPINB12Q96P63 405 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 HAPLN3Q96S86 360 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 ATP13A1Q9HD20 1204 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 ZNF212Q9UDV6 495 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 HEY1Q9Y5J3 304 aa17.22■□□□□ 0.35
AP004609.1-201ENST00000498872 SLC7A4O43246 635 aa17.21■□□□□ 0.35
AP004609.1-201ENST00000498872 TNFSF14O43557 240 aa17.21■□□□□ 0.35
AP004609.1-201ENST00000498872 IVLP07476 585 aa17.21■□□□□ 0.35
AP004609.1-201ENST00000498872 ARL4AP40617 200 aa17.21■□□□□ 0.35
AP004609.1-201ENST00000498872 NR2C2P49116 596 aa17.21■□□□□ 0.35
AP004609.1-201ENST00000498872 SCAPQ12770 1279 aa17.21■□□□□ 0.35
AP004609.1-201ENST00000498872 BNIP3Q12983 259 aa17.21■□□□□ 0.35
AP004609.1-201ENST00000498872 XRCC4Q13426 336 aa17.21■□□□□ 0.35
AP004609.1-201ENST00000498872 SKIDA1Q1XH10 827 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms