RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 GTF2A1LQ9UNN4 478 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 CARD8Q9Y2G2 431 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 TET3O43151 1660 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 PREX1Q8TCU6 1659 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 MADDQ8WXG6 1647 aa2.97□□□□□ -1.93
RIF1-212ENST00000498041 MAGI2Q86UL8 1455 aa2.96□□□□□ -1.93
RIF1-212ENST00000498041 PTPRTO14522 1441 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 PRAG1Q86YV5 1406 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 RIMS1Q86UR5 1692 aaKnown RBP2.96□□□□□ -1.94
RIF1-212ENST00000498041 A0A0U1RQF3 1178 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 DYTNA2CJ06 578 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 C4orf47A7E2U8 309 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 HSPB2A8KAH6 182 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 GTPBP1O00178 669 aaKnown RBP2.96□□□□□ -1.94
RIF1-212ENST00000498041 TACC1O75410 805 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 RGS11O94810 467 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 PAPSS2O95340 614 aaPredicted RBP2.96□□□□□ -1.94
RIF1-212ENST00000498041 VNN2O95498 520 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 HEXAP06865 529 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 TGFB3P10600 412 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 FCGR1AP12314 374 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 PLA2G2AP14555 144 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 GGT5P36269 586 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 PAFAH1B1P43034 410 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 TNNT2P45379 298 aaPredicted RBP2.96□□□□□ -1.94
RIF1-212ENST00000498041 CLDN2P57739 230 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 SEC61A1P61619 476 aaKnown RBP2.96□□□□□ -1.94
RIF1-212ENST00000498041 ITGADQ13349 1161 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 KEAP1Q14145 624 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 HSPB2Q16082 182 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 ASIC2Q16515 512 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 HIST2H2ACQ16777 129 aaPredicted RBP2.96□□□□□ -1.94
RIF1-212ENST00000498041 ESCO2Q56NI9 601 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 ZNF324BQ6AW86 544 aaPredicted RBP2.96□□□□□ -1.94
RIF1-212ENST00000498041 NADSYN1Q6IA69 706 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 CPLX2Q6PUV4 134 aaKnown RBP2.96□□□□□ -1.94
RIF1-212ENST00000498041 PARP16Q8N5Y8 322 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 AADATQ8N5Z0 425 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 NEXN-AS1Q8NBZ9 246 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 RNF125Q96EQ8 232 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 LRFN5Q96NI6 719 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 MMTAG2Q9BU76 263 aaKnown RBP2.96□□□□□ -1.94
RIF1-212ENST00000498041 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 NUF2Q9BZD4 464 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 VEZTQ9HBM0 779 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 SMYD2Q9NRG4 433 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 CYSLTR2Q9NS75 346 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 C20orf141Q9NUB4 165 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 PGAP2Q9UHJ9 254 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 CRYL1Q9Y2S2 319 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 CYP46A1Q9Y6A2 500 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 A3GALT2U3KPV4 340 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 METP08581 1390 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 USP47Q96K76 1375 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 ZNF518AQ6AHZ1 1483 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 MLH3Q9UHC1 1453 aa2.96□□□□□ -1.94
RIF1-212ENST00000498041 C3P01024 1663 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 RTEL1-TNFRSF6BF6WH68 1400 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 UHRF1BP1Q6BDS2 1440 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 PTPRUQ92729 1446 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 NEXMIFQ5QGS0 1516 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 TMEM131LA2VDJ0 1609 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 NRXN3Q9Y4C0 1643 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 IGLV5-52A0A0A0MRZ9 124 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 LOC102724159A0A0B4J2E5 919 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 TEX13CA0A0J9YWL9 993 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 A0A0U1RQJ8 604 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 LINC01553A4QN01 128 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 CYSRT1A8MQ03 144 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 J3KR12 359 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 ACOT8O14734 319 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 TIMM23O14925 209 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 NDUFB4O95168 129 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 CH25HO95992 272 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 IRF1P10914 325 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 ZNF12P17014 697 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 CD58P19256 250 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 CHATP28329 748 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 ARL1P40616 181 aaPredicted RBP2.95□□□□□ -1.94
RIF1-212ENST00000498041 TUBP50607 506 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 FOXD4Q12950 439 aaPredicted RBP2.95□□□□□ -1.94
RIF1-212ENST00000498041 TRAF3Q13114 568 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 PWP2Q15269 919 aaKnown RBP2.95□□□□□ -1.94
RIF1-212ENST00000498041 HSP90AB4PQ58FF6 505 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 SLC9C2Q5TAH2 1124 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 CRELD2Q6UXH1 353 aaPredicted RBP2.95□□□□□ -1.94
RIF1-212ENST00000498041 CCDC129Q6ZRS4 1044 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 SHFQ7M4L6 423 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 TCP11L2Q8N4U5 519 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 ARRDC2Q8TBH0 407 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 TMED6Q8WW62 240 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 ST8SIA4Q92187 359 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 KIF1BPQ96EK5 621 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 MPHOSPH8Q99549 860 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 LBHD1Q9BQE6 289 aaPredicted RBP2.95□□□□□ -1.94
RIF1-212ENST00000498041 MXRA8Q9BRK3 442 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 HEMGNQ9BXL5 484 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 SLCO5A1Q9H2Y9 848 aa2.95□□□□□ -1.94
RIF1-212ENST00000498041 C9orf78Q9NZ63 289 aaPredicted RBP2.95□□□□□ -1.94
RIF1-212ENST00000498041 WWOXQ9NZC7 414 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms