RNA–Protein interactions for RNA: ENST00000497216.2

SPTAN1-209, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 351 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-209ENST00000497216 SPECC1LQ69YQ0 1117 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 TMPRSS9Q7Z410 1059 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 ZNF438Q7Z4V0 828 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 C17orf82Q86X59 251 aaPredicted RBP13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 DTX1Q86Y01 620 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 ARHGAP12Q8IWW6 846 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 MCOLN2Q8IZK6 566 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 Q8N9G6 341 aaPredicted RBP13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 NEK11Q8NG66 645 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 KIAA1524Q8TCG1 905 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 CELF6Q96J87 481 aaKnown RBP13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 AGPAT1Q99943 283 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 SEMA3CQ99985 751 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 SLC39A8Q9C0K1 460 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 TMEM168Q9H0V1 697 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 WDR26Q9H7D7 661 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 MRPL40Q9NQ50 206 aaKnown RBP13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 KCTD5Q9NXV2 234 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 LRIT1Q9P2V4 623 aa13.56□□□□□ -0.24
SPTAN1-209ENST00000497216 PRSS38A1L453 326 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 LGALS16A8MUM7 142 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 EEF2KO00418 725 aaKnown RBP13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 PALMO75781 387 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 SFTPCP11686 197 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 MYCLP1P12525 358 aaPredicted RBP13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 ITIH1P19827 911 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 ETV5P41161 510 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 CSRP3P50461 194 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 COPB1P53618 953 aaKnown RBP13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 AP1S1P61966 158 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 B4GALNT1Q00973 533 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 BCL2L1Q07817 233 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 IL10RBQ08334 325 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 SRSF6Q13247 344 aaKnown RBP13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 ARHGEF7Q14155 803 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 MANEAQ5SRI9 462 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 ACAD10Q6JQN1 1059 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 PPP1R2P3Q6NXS1 205 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 PNCKQ6P2M8 343 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 DCUN1D2Q6PH85 259 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 SFTPA2Q8IWL1 248 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 GPBAR1Q8TDU6 330 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 COQ10AQ96MF6 247 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 ERGIC2Q96RQ1 377 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 CINPQ9BW66 212 aaPredicted RBP13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 LGR4Q9BXB1 951 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 FAM117AQ9C073 453 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 CYP4F12Q9HCS2 524 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 CHMP5Q9NZZ3 219 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 LIMA1Q9UHB6 759 aaKnown RBP13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 PCDHGA4Q9Y5G9 962 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 GTF3C3Q9Y5Q9 886 aa13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 HEMK1Q9Y5R4 338 aaPredicted RBP13.55□□□□□ -0.24
SPTAN1-209ENST00000497216 B4DGG1 531 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 C9orf172C9J069 976 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 TERTO14746 1132 aaKnown RBP13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 CPNE6O95741 557 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 CCNB1P14635 433 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 ITGB6P18564 788 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 RENBPP51606 427 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 ZNF135P52742 658 aaPredicted RBP13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 NFATC3Q12968 1075 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 CA9Q16790 459 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 ERMARDQ5T6L9 678 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 RFX8Q6ZV50 586 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 PRICKLE2Q7Z3G6 844 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 ZFAND4Q86XD8 727 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 PSTKQ8IV42 348 aaKnown RBP13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 PELI3Q8N2H9 469 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 CCL4L1Q8NHW4 92 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 EXTL1Q92935 676 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 USP7Q93009 1102 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 NSMCE3Q96MG7 304 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 ZNF599Q96NL3 588 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 PSKH2Q96QS6 385 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 ARHGAP9Q9BRR9 750 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 SYT11Q9BT88 431 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 TEX101Q9BY14 249 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 DPEP2Q9H4A9 486 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 DHX35Q9H5Z1 703 aaKnown RBP13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 SP110Q9HB58 689 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 SEPT11Q9NVA2 429 aaKnown RBP13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 FANCLQ9NW38 375 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 GPATCH2LQ9NWQ4 482 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 TRNAU1APQ9NX07 287 aaKnown RBP13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 FOXJ2Q9P0K8 574 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 FLNCQ14315 2725 aa13.54□□□□□ -0.24
SPTAN1-209ENST00000497216 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 A0A1W2PQ67 120 aa13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 LRRC10BA6NIK2 292 aa13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 PYCARD-AS1I3L0S3 204 aa13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 HGSO14964 777 aaPredicted RBP13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 HTRA2O43464 458 aaPredicted RBP13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 B4GAT1O43505 415 aa13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 SOCS5O75159 536 aa13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 CCDC172P0C7W6 258 aa13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 KRT10P13645 584 aa13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 FERP16591 822 aa13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 ERCC2P18074 760 aa13.53□□□□□ -0.24
SPTAN1-209ENST00000497216 TEAD1P28347 426 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms