RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 FBXO9Q9UK97 447 aaPredicted RBP4.91□□□□□ -1.62
VPS36-206ENST00000497149 FZD10Q9ULW2 581 aa4.91□□□□□ -1.62
VPS36-206ENST00000497149 TMEM202A6NGA9 273 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 MYO1GB0I1T2 1018 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 IPO7O95373 1038 aaKnown RBP4.9□□□□□ -1.63
VPS36-206ENST00000497149 ZNF182P17025 639 aaPredicted RBP4.9□□□□□ -1.63
VPS36-206ENST00000497149 CD58P19256 250 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 COMPP49747 757 aaPredicted RBP4.9□□□□□ -1.63
VPS36-206ENST00000497149 NUDT6P53370 316 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 F2RL1P55085 397 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 Q0VFX4 171 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 NAE1Q13564 534 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 KRT24Q2M2I5 525 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 ZNF260Q3ZCT1 412 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 C6orf141Q5SZD1 244 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 SPATA1Q5VX52 437 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 PLEKHA7Q6IQ23 1121 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 ANKRD54Q6NXT1 300 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 CFAP161Q6P656 301 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 DLK2Q6UY11 383 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 MTSS1LQ765P7 747 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 PELI3Q8N2H9 469 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 TTC39CQ8N584 583 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 WDTC1Q8N5D0 677 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 AADATQ8N5Z0 425 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 PRR26Q8N8Z3 221 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 SCARB1Q8WTV0 552 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 SCFD2Q8WU76 684 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 OIT3Q8WWZ8 545 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 CAMK1GQ96NX5 476 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 SDF4Q9BRK5 362 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 DCLK3Q9C098 648 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 GHITMQ9H3K2 345 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 FBXO2Q9UK22 296 aaPredicted RBP4.9□□□□□ -1.63
VPS36-206ENST00000497149 SLC45A1Q9Y2W3 748 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 STON1Q9Y6Q2 735 aa4.9□□□□□ -1.63
VPS36-206ENST00000497149 RSF1Q96T23 1441 aaPredicted RBP4.89□□□□□ -1.63
VPS36-206ENST00000497149 IGHV4-28A0A0C4DH34 117 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 FRMD3A2A2Y4 597 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 MYMKA6NI61 221 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 PRSS47A8MTI9 375 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 GTPBP1O00178 669 aaKnown RBP4.89□□□□□ -1.63
VPS36-206ENST00000497149 AP3D1O14617 1153 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 WNT9BO14905 357 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 TIMM23O14925 209 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 NKX2-2O95096 273 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 IL7RP16871 459 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 SCP2P22307 547 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 TM4SF1P30408 202 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 ARRB2P32121 409 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 PPARGP37231 505 aaPredicted RBP4.89□□□□□ -1.63
VPS36-206ENST00000497149 MMEL1Q495T6 779 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 AWAT2Q6E213 333 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 KLHL35Q6PF15 583 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 SARM1Q6SZW1 724 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 CCDC129Q6ZRS4 1044 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 FASTKD5Q7L8L6 764 aaKnown RBP4.89□□□□□ -1.63
VPS36-206ENST00000497149 SHFQ7M4L6 423 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 NEXN-AS1Q8NBZ9 246 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 POMGNT1Q8WZA1 660 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 CMTM3Q96MX0 182 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 LRFN5Q96NI6 719 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 TMEM47Q9BQJ4 181 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 SF3B5Q9BWJ5 86 aaKnown RBP4.89□□□□□ -1.63
VPS36-206ENST00000497149 EBF3Q9H4W6 596 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 ESRP2Q9H6T0 727 aaKnown RBP4.89□□□□□ -1.63
VPS36-206ENST00000497149 KAT14Q9H8E8 782 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 RANGRFQ9HD47 186 aaPredicted RBP4.89□□□□□ -1.63
VPS36-206ENST00000497149 GPR108Q9NPR9 543 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 ERVK-11Q9UQG0 969 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 PAM16Q9Y3D7 125 aa4.89□□□□□ -1.63
VPS36-206ENST00000497149 A6NCN8 305 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 FAM90A8PA6NJQ4 464 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 PTGES3LE9PB15 166 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 HSPA12AO43301 675 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 GFPT2O94808 682 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 IGKV2-30P06310 120 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 FAM90A13PP0C7W8 464 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 FAM90A24PP0C7X0 464 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 HOXD13P35453 343 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 HADHAP40939 763 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 KCNJ4P48050 445 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 AMTP48728 403 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 MXI1P50539 228 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 PRAMEP78395 509 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 PRKG2Q13237 762 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 CRYMQ14894 314 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 MEA1Q16626 185 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 ZNF549Q6P9A3 640 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 CCDC13Q8IYE1 715 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 NSMCE1Q8WV22 266 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 SGCDQ92629 289 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 ARHGEF26Q96DR7 871 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 PPP1R13BQ96KQ4 1090 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 FTOQ9C0B1 505 aaKnown RBP eCLIP4.88□□□□□ -1.63
VPS36-206ENST00000497149 KCNN2Q9H2S1 579 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 PDZD7Q9H5P4 517 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 SYNCQ9H7C4 482 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 RRP7BPQ9NSQ0 103 aa4.88□□□□□ -1.63
VPS36-206ENST00000497149 HAUS2Q9NVX0 235 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms