RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 FGF22Q9HCT0 170 aa13□□□□□ -0.33
FN1-226ENST00000496542 ASCL3Q9NQ33 180 aa13□□□□□ -0.33
FN1-226ENST00000496542 THSD1Q9NS62 852 aa13□□□□□ -0.33
FN1-226ENST00000496542 B4GALT6Q9UBX8 382 aa13□□□□□ -0.33
FN1-226ENST00000496542 ANAPC7Q9UJX3 599 aa13□□□□□ -0.33
FN1-226ENST00000496542 PCDHGC4Q9Y5F7 938 aa13□□□□□ -0.33
FN1-226ENST00000496542 A0A1W2PQJ5 194 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 PMS2P1A4D2B8 440 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 TMEM202A6NGA9 273 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 PEX11BO96011 259 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 CPP00450 1065 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 GM2AP17900 193 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 HSPA9P38646 679 aaKnown RBP12.99□□□□□ -0.33
FN1-226ENST00000496542 SSR1P43307 286 aaKnown RBP12.99□□□□□ -0.33
FN1-226ENST00000496542 ERVPABLB-1P60509 514 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 CXADRP78310 365 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 PIGHQ14442 188 aaPredicted RBP12.99□□□□□ -0.33
FN1-226ENST00000496542 KRT81Q14533 505 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 BROXQ5VW32 411 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 DENND2CQ68D51 928 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 BBS5Q8N3I7 341 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 SDR16C5Q8N3Y7 309 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 PGBD5Q8N414 524 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 OR56A4Q8NGH8 313 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 NSMCE1Q8WV22 266 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 CPLX3Q8WVH0 158 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 TEKT4Q8WW24 435 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 KCNE4Q8WWG9 221 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 GRAMD1AQ96CP6 724 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 NUS1Q96E22 293 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 RBM15Q96T37 977 aaKnown RBP eCLIP12.99□□□□□ -0.33
FN1-226ENST00000496542 NUP85Q9BW27 656 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 WDR26Q9H7D7 661 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 SUDS3Q9H7L9 328 aaPredicted RBP12.99□□□□□ -0.33
FN1-226ENST00000496542 NOD2Q9HC29 1040 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 PCDH18Q9HCL0 1135 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 MRPL40Q9NQ50 206 aaKnown RBP12.99□□□□□ -0.33
FN1-226ENST00000496542 RABGEF1Q9UJ41 708 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 MOSPD1Q9UJG1 213 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 BZW2Q9Y6E2 419 aaKnown RBP12.99□□□□□ -0.33
FN1-226ENST00000496542 DGKBQ9Y6T7 804 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 ZNF462Q96JM2 2506 aa12.99□□□□□ -0.33
FN1-226ENST00000496542 HTRA2O43464 458 aaPredicted RBP12.98□□□□□ -0.33
FN1-226ENST00000496542 SOCS5O75159 536 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 SERPING1P05155 500 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 RPLP0P05388 317 aaKnown RBP12.98□□□□□ -0.33
FN1-226ENST00000496542 KELP23276 732 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 SERPINB6P35237 376 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 GJC1P36383 396 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 PBX1P40424 430 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 MMP13P45452 471 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 PDX1P52945 283 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 CDH6P55285 790 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 UBASH3AP57075 661 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 MAXP61244 160 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 SLC25A11Q02978 314 aaKnown RBP12.98□□□□□ -0.33
FN1-226ENST00000496542 TRAF2Q12933 501 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 CNGA3Q16281 694 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 GPR155Q7Z3F1 870 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 TAF8Q7Z7C8 310 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 PELI3Q8N2H9 469 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 NIPA2Q8N8Q9 360 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 WDR36Q8NI36 951 aaKnown RBP12.98□□□□□ -0.33
FN1-226ENST00000496542 SYN2Q92777 582 aaPredicted RBP12.98□□□□□ -0.33
FN1-226ENST00000496542 GFM1Q96RP9 751 aaKnown RBP12.98□□□□□ -0.33
FN1-226ENST00000496542 NUDCD1Q96RS6 583 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 MGME1Q9BQP7 344 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 EPB41L5Q9HCM4 733 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 CYP4F12Q9HCS2 524 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 IP6K2Q9UHH9 426 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 PIEZO2Q9H5I5 2752 aa12.98□□□□□ -0.33
FN1-226ENST00000496542 A0A087X0T9 212 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 CCDC187A0A096LP49 1063 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 GOLGA6CA6NDK9 693 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 GOLGA6BA6NDN3 693 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 B4DGG1 531 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 NTN3O00634 580 aaPredicted RBP12.97□□□□□ -0.33
FN1-226ENST00000496542 KLK10O43240 276 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 MAFKO60675 156 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 PRB1P04280 392 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 CYP1A2P05177 515 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 FAM228BP0C875 321 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 GOLGA6DP0CG33 693 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 CR2P20023 1033 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 NFKBIAP25963 317 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 VIPR1P32241 457 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 TMPRSS3P57727 454 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 CCL7P80098 99 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 ZBED6P86452 979 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 MMRN1Q13201 1228 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 PNCKQ6P2M8 343 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 IGF2-ASQ6U949 168 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 B3GNT8Q7Z7M8 397 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 Q8N9G6 341 aaPredicted RBP12.97□□□□□ -0.33
FN1-226ENST00000496542 FAM46DQ8NEK8 389 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 PRR11Q96HE9 360 aaPredicted RBP12.97□□□□□ -0.33
FN1-226ENST00000496542 COQ10AQ96MF6 247 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 SLC46A1Q96NT5 459 aa12.97□□□□□ -0.33
FN1-226ENST00000496542 LGR4Q9BXB1 951 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms