RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 TP53I13Q8NBR0 393 aaPredicted RBP9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 OR52K2Q8NGK3 314 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 TAS1R2Q8TE23 839 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 FAM149B1Q96BN6 582 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 C19orf60Q96EN9 201 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 ZSCAN31Q96LW9 406 aaPredicted RBP9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 WDR92Q96MX6 357 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 ZDHHC6Q9H6R6 413 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 ACSS2Q9NR19 701 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 VPS51Q9UID3 782 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 OR51B4Q9Y5P0 310 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 DGKBQ9Y6T7 804 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 KCNU1A8MYU2 1149 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 ESPNB1AK53 854 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 POLR1CO15160 346 aaPredicted RBP9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 LRRTM2O43300 516 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 CLDN11O75508 207 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 CREG1O75629 220 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 FBXO21O94952 628 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 RHOCP08134 193 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 NFKBIAP25963 317 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 CSF2RBP32927 897 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 CCNHP51946 323 aaPredicted RBP9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 LRRC14Q15048 493 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 BRD3Q15059 726 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 KLHL40Q2TBA0 621 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 PAPD7Q5XG87 772 aaKnown RBP9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 CDH24Q86UP0 819 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 XYLT1Q86Y38 959 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 HPS6Q86YV9 775 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 IRF2BP1Q8IU81 584 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 MEIOBQ8N635 442 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 PCDH20Q8N6Y1 951 aaKnown RBP9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 DCAF4L2Q8NA75 395 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 CLEC4CQ8WTT0 213 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 SEC14L1Q92503 715 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 SNRNP40Q96DI7 357 aaKnown RBP9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 NAP1L5Q96NT1 182 aaPredicted RBP9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 PRMT1Q99873 361 aaKnown RBP9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 TRIM62Q9BVG3 475 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 ULBP3Q9BZM4 244 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 TNMDQ9H2S6 317 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 MLXIPLQ9NP71 852 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 FBXO8Q9NRD0 319 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 ASF1BQ9NVP2 202 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 COPG2Q9UBF2 871 aa9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 TNRC6AQ8NDV7 1962 aaKnown RBP9.66□□□□□ -0.86
SMARCAL1-213ENST00000496037 C16orf96A6NNT2 1141 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 ZG16O60844 167 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 MMP20O60882 483 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 COX6B1P14854 86 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 CD1EP15812 388 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 MASP1P48740 699 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 CCL11P51671 97 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 ITGA1P56199 1179 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 KNOP1Q1ED39 458 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 SNAP47Q5SQN1 464 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 CPZQ66K79 652 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 RETSATQ6NUM9 610 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 FBXL22Q6P050 247 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 TMEM71Q6P5X7 295 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 C6orf15Q6UXA7 325 aaPredicted RBP9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 LYSMD3Q7Z3D4 306 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 SLC47A2Q86VL8 602 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 RHOT1Q8IXI2 618 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 RYBPQ8N488 228 aaPredicted RBP9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 ZDHHC1Q8WTX9 485 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 THAP4Q8WY91 577 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 HDAC11Q96DB2 347 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 STAMBPL1Q96FJ0 436 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 AHCYL2Q96HN2 611 aaKnown RBP9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 PSMB7Q99436 277 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 APOOQ9BUR5 198 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 PANK2Q9BZ23 570 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 CEP44Q9C0F1 390 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 MIS12Q9H081 205 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 MMRN2Q9H8L6 949 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 APMAPQ9HDC9 416 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 TMEM9Q9P0T7 183 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 VANGL2Q9ULK5 521 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 OR1A2Q9Y585 309 aa9.65□□□□□ -0.86
SMARCAL1-213ENST00000496037 IGHV1OR21-1A0A087WYE8 117 aa9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 ZSCAN5CA6NGD5 496 aaPredicted RBP9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 A8MU76 341 aa9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 CACNB4O00305 520 aaPredicted RBP9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 SART1O43290 800 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 ADCY5O95622 1261 aa9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 FYNP06241 537 aa9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 SNRPB2P08579 225 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 SLC2A3P11169 496 aa9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 KELP23276 732 aa9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 GCLMP48507 274 aa9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 ST13P50502 369 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 CDH4P55283 916 aa9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 DNM1Q05193 864 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 CHAF1BQ13112 559 aa9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 ZNF805Q5CZA5 627 aa9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 CARD16Q5EG05 197 aa9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 WDR75Q8IWA0 830 aaKnown RBP9.64□□□□□ -0.87
SMARCAL1-213ENST00000496037 OR56A4Q8NGH8 313 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms