RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 HDAC4P56524 1084 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 TAS2R40P59535 323 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 KRT81Q14533 505 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 C5orf22Q49AR2 442 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 RAB6CQ53S08 254 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 ERMARDQ5T6L9 678 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 SCYL2Q6P3W7 929 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 KYAT3Q6YP21 454 aaKnown RBP11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 RBM44Q6ZP01 1051 aaKnown RBP11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 PARGQ86W56 976 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 SFTPA2Q8IWL1 248 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 ACTRT1Q8TDG2 376 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 EXTL1Q92935 676 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 CCDC3Q9BQI4 270 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 MAGEB5Q9BZ81 275 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 FOXP3Q9BZS1 431 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 TM6SF2Q9BZW4 377 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 RAB6CQ9H0N0 254 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 ZWILCHQ9H900 591 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 L2HGDHQ9H9P8 463 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 RRAGDQ9NQL2 400 aaPredicted RBP11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 IPO11Q9UI26 975 aaKnown RBP11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 EFR3BQ9Y2G0 817 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 HS3ST3A1Q9Y663 406 aa11.87□□□□□ -0.51
CSNK1E-212ENST00000494610 CAPN8A6NHC0 703 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 LZTS3O60299 673 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 NOBOXO60393 691 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 SRGAP2O75044 1071 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 ZNF189O75820 626 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 ZMPSTE24O75844 475 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 CD160O95971 181 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 PRNPP04156 253 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 WT1P19544 449 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 ARL4AP40617 200 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 CXCR3P49682 368 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 PEX5P50542 639 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 CCNHP51946 323 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 NEK3P51956 506 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 OXCT1P55809 520 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 RPS21P63220 83 aaKnown RBP11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 CYP4F2P78329 520 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 ARF5P84085 180 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 TFDP2Q14188 446 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 NR0B2Q15466 257 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 DPYSL2Q16555 572 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 PRRT3Q5FWE3 981 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 TFDP3Q5H9I0 405 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 C6orf132Q5T0Z8 1188 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 KCTD16Q68DU8 428 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 RASGEF1CQ8N431 466 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 KCTD6Q8NC69 237 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 ALG3Q92685 438 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 KRT35Q92764 455 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 RUNDC3BQ96NL0 473 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 EPAS1Q99814 870 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 ZNF670Q9BS34 389 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 SNRNP25Q9BV90 132 aaKnown RBP11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 LRRC61Q9BV99 259 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 C2orf49Q9BVC5 232 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 DUSP23Q9BVJ7 150 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 BOCQ9BWV1 1114 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 ZDHHC6Q9H6R6 413 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 WDCPQ9H6R7 721 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 MBNL1Q9NR56 388 aaKnown RBP11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 HOMER3Q9NSC5 361 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 NDFIP2Q9NV92 336 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 DONSONQ9NYP3 566 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 SIRPGQ9P1W8 387 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 PCSK1NQ9UHG2 260 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 AP4E1Q9UPM8 1137 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 FARP1Q9Y4F1 1045 aaPredicted RBP11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 PCDHGA8Q9Y5G5 932 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 DOCK4Q8N1I0 1966 aa11.86□□□□□ -0.51
CSNK1E-212ENST00000494610 LRRK2Q5S007 2527 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 CTAGE15A4D2H0 777 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 DRGXA6NNA5 263 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 H3BRJ5 948 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 CCDC188H7C350 402 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 FANCGO15287 622 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 YY2O15391 372 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 TJP3O95049 919 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 FAM87AP0C7U9 286 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 CTAGE8P0CG41 777 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 RARAP10276 462 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 TSHRP16473 764 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 ZFXP17010 805 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 SLC5A2P31639 672 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 L1CAMP32004 1257 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 IGFALSP35858 605 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 ACVRL1P37023 503 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 CDH6P55285 790 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 PFN3P60673 137 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 SMTNL2Q2TAL5 461 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 CCDC70Q6NSX1 233 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 IGF2-ASQ6U949 168 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 ZNF572Q7Z3I7 529 aaPredicted RBP11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 CLEC14AQ86T13 490 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 CTAGE6Q86UF2 777 aa11.85□□□□□ -0.51
CSNK1E-212ENST00000494610 VASH2Q86V25 355 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms