RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 NRP2O60462 931 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 PAGE1O75459 146 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 GPIP06744 558 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 SBK3P0C264 359 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 UMPSP11172 480 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 CD9P21926 228 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 MAPKAPK2P49137 400 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 RAB15P59190 212 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 TAS2R39P59534 338 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 ATP6V0D1P61421 351 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 PRAMEP78395 509 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 ACVR1Q04771 509 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 SULT2A1Q06520 285 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 PPIGQ13427 754 aaKnown RBP eCLIP11.53□□□□□ -0.563e-7■■□□□ 11.7
RFC4-214ENST00000494047 PDAP1Q13442 181 aaKnown RBP11.53□□□□□ -0.56
RFC4-214ENST00000494047 POU6F1Q14863 301 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 DLG2Q15700 870 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 INTS11Q5TA45 600 aaKnown RBP11.53□□□□□ -0.56
RFC4-214ENST00000494047 MARC1Q5VT66 337 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 FOXB2Q5VYV0 432 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 DENND5AQ6IQ26 1287 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 TXNDC11Q6PKC3 985 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 MON1AQ86VX9 555 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 LSMEM2Q8N112 164 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 RNF169Q8NCN4 708 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 SPPL2BQ8TCT7 592 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 HEXDCQ8WVB3 486 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 NXNL1Q96CM4 212 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 HIC2Q96JB3 615 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 SUSD3Q96L08 255 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 CEP295NLQ96MC4 621 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 TCF12Q99081 682 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 LPIN3Q9BQK8 851 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 OXCT2Q9BYC2 517 aaPredicted RBP11.53□□□□□ -0.56
RFC4-214ENST00000494047 ZYG11BQ9C0D3 744 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 WDR55Q9H6Y2 383 aaPredicted RBP11.53□□□□□ -0.56
RFC4-214ENST00000494047 SP110Q9HB58 689 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 CD320Q9NPF0 282 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 ADA2Q9NZK5 511 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 NEU3Q9UQ49 428 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 COMMD10Q9Y6G5 202 aa11.53□□□□□ -0.56
RFC4-214ENST00000494047 TDRD15B5MCY1 1934 aaKnown RBP11.52□□□□□ -0.56
RFC4-214ENST00000494047 ARL5CA6NH57 179 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 CAPN8A6NHC0 703 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 A8MT66 165 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 E9PAM4 449 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 TMEM189-UBE2V1I3L0A0 370 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 IFRD1O00458 451 aaPredicted RBP11.52□□□□□ -0.57
RFC4-214ENST00000494047 MRASO14807 208 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 TRIM24O15164 1050 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 HCRTO43612 131 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 CRTAMO95727 393 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 CHEK2O96017 543 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 HSD17B1P14061 328 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 IDO1P14902 403 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 XRCC1P18887 633 aaPredicted RBP11.52□□□□□ -0.57
RFC4-214ENST00000494047 IL10P22301 178 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 SUOXP51687 545 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 CLCNKBP51801 687 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 WNT3AP56704 352 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 ESRRGP62508 458 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 HERVK_113P63132 956 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 IL10RBQ08334 325 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 APOFQ13790 326 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 CEACAM7Q14002 265 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 LRP8Q14114 963 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 KCTD21Q4G0X4 260 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 REP15Q6BDI9 236 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 OVOS1Q6IE37 1185 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 KRT80Q6KB66 452 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 KDELC1Q6UW63 502 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 SPATA19Q7Z5L4 167 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 CAMK1DQ8IU85 385 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 GALNT13Q8IUC8 556 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 CILP2Q8IUL8 1156 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 TMEM130Q8N3G9 435 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 AADATQ8N5Z0 425 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 TEX26Q8N6G2 289 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 ANKFN1Q8N957 763 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 TXNDC5Q8NBS9 432 aaKnown RBP11.52□□□□□ -0.57
RFC4-214ENST00000494047 PNPT1Q8TCS8 783 aaKnown RBP11.52□□□□□ -0.57
RFC4-214ENST00000494047 TMA16Q96EY4 203 aaKnown RBP11.52□□□□□ -0.57
RFC4-214ENST00000494047 FEM1CQ96JP0 617 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 SLC45A3Q96JT2 553 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 FCRL2Q96LA5 508 aaPredicted RBP11.52□□□□□ -0.57
RFC4-214ENST00000494047 MRGPRX2Q96LB1 330 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 GCNAQ96QF7 691 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 OMDQ99983 421 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 ERVK-6Q9BXR3 956 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 YTHDF1Q9BYJ9 559 aaKnown RBP11.52□□□□□ -0.57
RFC4-214ENST00000494047 TRIM54Q9BYV2 358 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 HIPK3Q9H422 1215 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 TFB2MQ9H5Q4 396 aaKnown RBP11.52□□□□□ -0.57
RFC4-214ENST00000494047 IGSF5Q9NSI5 407 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 TMEM181Q9P2C4 612 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 ATXN10Q9UBB4 475 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 SCML2Q9UQR0 700 aa11.52□□□□□ -0.57
RFC4-214ENST00000494047 AP3M1Q9Y2T2 418 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms