RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 SUZ12Q15022 739 aaKnown RBP8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 SF3A2Q15428 464 aaKnown RBP8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 PARP6Q2NL67 630 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 ZNF284Q2VY69 593 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 INAVAQ3KP66 663 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 UAP1L1Q3KQV9 507 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 PLA2G2CQ5R387 149 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 IQCHQ86VS3 1027 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 DCP2Q8IU60 420 aaKnown RBP8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 SLC25A41Q8N5S1 370 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 CNTD1Q8N815 330 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 MFSD2AQ8NA29 543 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 SPATA22Q8NHS9 363 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 ARRDC2Q8TBH0 407 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 CCDC110Q8TBZ0 833 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 ASB12Q8WXK4 309 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 ATG4AQ8WYN0 398 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 PIEZO1Q92508 2521 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 MAGOHBQ96A72 148 aaKnown RBP8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 ECHDC3Q96DC8 303 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 NUS1Q96E22 293 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 SCRN2Q96FV2 425 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 SLC6A18Q96N87 628 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 LENG8Q96PV6 779 aaPredicted RBP8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 HERPUD2Q9BSE4 406 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 SMOC1Q9H4F8 434 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 OCEL1Q9H607 264 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 C10orf88Q9H8K7 445 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 FZD3Q9NPG1 666 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 RAD18Q9NS91 495 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 TMEM74BQ9NUR3 256 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 PAK5Q9P286 719 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 GGT7Q9UJ14 662 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 CDV3Q9UKY7 258 aaKnown RBP8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 SNX12Q9UMY4 172 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 DRG1Q9Y295 367 aaKnown RBP8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 ANKRD6Q9Y2G4 727 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 R3HDM2Q9Y2K5 976 aaKnown RBP8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 FRYLO94915 3013 aa8.16□□□□□ -1.1
TM4SF1-204ENST00000493348 TMEM131Q92545 1883 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 TCRBV7S2A1N4TA0A589 114 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 CAPN8A6NHC0 703 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 GOLGA8CPA6NN73 597 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 PATE3B3GLJ2 98 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 H3BM21 787 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 TLR4O00206 839 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 CACNB4O00305 520 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 PDE2AO00408 941 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 WNT9AO14904 365 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 VILLO15195 856 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 YKT6O15498 198 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 GCATO75600 419 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 TUBB4AP04350 444 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 PCCBP05166 539 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 FGF1P05230 155 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 ITGAVP06756 1048 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 PDHA1P08559 390 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 ALPIP09923 528 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 ENGP17813 658 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 ITIH2P19823 946 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 PSMB4P28070 264 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 HNF1BP35680 557 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 WNT3AP56704 352 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 IRX4P78413 519 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 SARNPP82979 210 aaKnown RBP8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 PDE1BQ01064 536 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 SEMG2Q02383 582 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 GRIK2Q13002 908 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 TMEM259Q4ZIN3 620 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 PEAR1Q5VY43 1037 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 LRRC66Q68CR7 880 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 RAET1GQ6H3X3 334 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 LIPIQ6XZB0 460 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 PPP1R21Q6ZMI0 780 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 LINC00523Q86TU6 105 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 ZSWIM9Q86XI8 627 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 DNAAF3Q8N9W5 541 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 SLC35B2Q8TB61 432 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 NETO1Q8TDF5 533 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 ACTRT1Q8TDG2 376 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 PIH1D2Q8WWB5 315 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 CAPZA3Q96KX2 299 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 RUNDC3BQ96NL0 473 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 TBL1YQ9BQ87 522 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 FICDQ9BVA6 458 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 C1QTNF2Q9BXJ5 285 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 TMEM121BQ9BXQ6 578 aaPredicted RBP8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 TRABDQ9H4I3 376 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 GAREM1Q9H706 876 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 LRRC40Q9H9A6 602 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 ZFYVE1Q9HBF4 777 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 HACD3Q9P035 362 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 RNF14Q9UBS8 474 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 ZFR2Q9UPR6 939 aaKnown RBP8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 COQ6Q9Y2Z9 468 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 PKP3Q9Y446 797 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 KNL1Q8NG31 2342 aa8.15□□□□□ -1.1
TM4SF1-204ENST00000493348 GPR179Q6PRD1 2367 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms