RNA–Protein interactions for RNA: ENST00000493018.5

RPL35-204, Transcript of ribosomal protein L35, humanhuman

TSL 3

Gene RPL35, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-204ENST00000493018 ZIM3Q96PE6 472 aa13.54□□□□□ -0.24
RPL35-204ENST00000493018 MCCC1Q96RQ3 725 aaPredicted RBP13.54□□□□□ -0.24
RPL35-204ENST00000493018 WDR83Q9BRX9 315 aaKnown RBP13.54□□□□□ -0.24
RPL35-204ENST00000493018 HDAC8Q9BY41 377 aa13.54□□□□□ -0.24
RPL35-204ENST00000493018 ACSS3Q9H6R3 686 aa13.54□□□□□ -0.24
RPL35-204ENST00000493018 POLMQ9NP87 494 aaPredicted RBP13.54□□□□□ -0.24
RPL35-204ENST00000493018 ZDHHC4Q9NPG8 344 aa13.54□□□□□ -0.24
RPL35-204ENST00000493018 TXNDC16Q9P2K2 825 aa13.54□□□□□ -0.24
RPL35-204ENST00000493018 FETUBQ9UGM5 382 aa13.54□□□□□ -0.24
RPL35-204ENST00000493018 HCN2Q9UL51 889 aa13.54□□□□□ -0.24
RPL35-204ENST00000493018 MMP17Q9ULZ9 603 aa13.54□□□□□ -0.24
RPL35-204ENST00000493018 ZNF106Q9H2Y7 1883 aaKnown RBP13.53□□□□□ -0.24
RPL35-204ENST00000493018 ATG2BQ96BY7 2078 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 STK25O00506 426 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 MAP2K7O14733 419 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 PFDN6O15212 129 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 LDB2O43679 373 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 OPA1O60313 960 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 ALDH1A2O94788 518 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 SLC4A1P02730 911 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 ALPIP09923 528 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 PIRTP0C851 137 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 CD72P21854 359 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 NMBRP28336 390 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 VIPR1P32241 457 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 HNF1BP35680 557 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 HMGCLP35914 325 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 FAM193AP78312 1265 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 SATB1Q01826 763 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 ZBTB16Q05516 673 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 MGAT5Q09328 741 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 ILF2Q12905 390 aaKnown RBP13.53□□□□□ -0.24
RPL35-204ENST00000493018 MSLNQ13421 630 aaPredicted RBP13.53□□□□□ -0.24
RPL35-204ENST00000493018 TTC31Q49AM3 519 aaPredicted RBP13.53□□□□□ -0.24
RPL35-204ENST00000493018 IER5LQ5T953 404 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 ERN2Q76MJ5 926 aaKnown RBP13.53□□□□□ -0.24
RPL35-204ENST00000493018 PARS2Q7L3T8 475 aaKnown RBP13.53□□□□□ -0.24
RPL35-204ENST00000493018 TAOK1Q7L7X3 1001 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 KCNMB4Q86W47 210 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 RASSF3Q86WH2 238 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 CTAGE3PQ8IX95 158 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 SIX5Q8N196 739 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 RIBC1Q8N443 379 aaPredicted RBP13.53□□□□□ -0.24
RPL35-204ENST00000493018 UHMK1Q8TAS1 419 aaKnown RBP13.53□□□□□ -0.24
RPL35-204ENST00000493018 MFSD3Q96ES6 412 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 FAM167BQ9BTA0 163 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 EPB41L4BQ9H329 900 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 LMAN1LQ9HAT1 526 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 LTB4R2Q9NPC1 389 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 RAD18Q9NS91 495 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 C20orf96Q9NUD7 363 aaPredicted RBP13.53□□□□□ -0.24
RPL35-204ENST00000493018 NLE1Q9NVX2 485 aaPredicted RBP13.53□□□□□ -0.24
RPL35-204ENST00000493018 ZFATQ9P243 1243 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 SLC24A2Q9UI40 661 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 SPO11Q9Y5K1 396 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 ARL5AQ9Y689 179 aa13.53□□□□□ -0.24
RPL35-204ENST00000493018 SCN8AQ9UQD0 1980 aa13.52□□□□□ -0.24
RPL35-204ENST00000493018 CHURC1-FNTBB4DL54 471 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 H0Y858 1186 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 NEMP1O14524 444 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 SLC7A4O43246 635 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 RPP40O75818 363 aaKnown RBP13.52□□□□□ -0.25
RPL35-204ENST00000493018 PRKCGP05129 697 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 INHBAP08476 426 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 CHRNB1P11230 501 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 ACADMP11310 421 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 ADRB3P13945 408 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 TIMP2P16035 220 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 ATP5DP30049 168 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 MSH2P43246 934 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 CNGA3Q16281 694 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 HSP90B2PQ58FF3 399 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 CEP85LQ5SZL2 805 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 LGSNQ5TDP6 509 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 ESRP1Q6NXG1 681 aaKnown RBP13.52□□□□□ -0.25
RPL35-204ENST00000493018 CES3Q6UWW8 571 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 DPPA4Q7L190 304 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 LYSMD3Q7Z3D4 306 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 KBTBD6Q86V97 674 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 LRRC6Q86X45 466 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 RAVER1Q8IY67 606 aaKnown RBP13.52□□□□□ -0.25
RPL35-204ENST00000493018 MDGA1Q8NFP4 955 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 OR4K2Q8NGD2 314 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 OR6P1Q8NGX9 317 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.52□□□□□ -0.25
RPL35-204ENST00000493018 PBXIP1Q96AQ6 731 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 OMDQ99983 421 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 TMEM109Q9BVC6 243 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 OSBPL6Q9BZF3 934 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 STMN4Q9H169 189 aaPredicted RBP13.52□□□□□ -0.25
RPL35-204ENST00000493018 PCDH12Q9NPG4 1184 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 TREX1Q9NSU2 369 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 ZNF446Q9NWS9 450 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 MOCS1Q9NZB8 636 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 PKD2L2Q9NZM6 624 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 RABGEF1Q9UJ41 708 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 APPL1Q9UKG1 709 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 SARDHQ9UL12 918 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 NCKAP1Q9Y2A7 1128 aa13.52□□□□□ -0.25
RPL35-204ENST00000493018 ZCWPW2A0A1B0GU75 182 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms