RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 C17orf53Q8N3J3 647 aaPredicted RBP4.07□□□□□ -1.76
CLK1-213ENST00000492793 TMEM163Q8TC26 289 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 NEK9Q8TD19 979 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 ASB5Q8WWX0 329 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 TXNDC15Q96J42 360 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 HARBI1Q96MB7 349 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 TMEM68Q96MH6 324 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 TREX2Q9BQ50 279 aaPredicted RBP4.07□□□□□ -1.76
CLK1-213ENST00000492793 TMEM47Q9BQJ4 181 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 SF3B5Q9BWJ5 86 aaKnown RBP4.07□□□□□ -1.76
CLK1-213ENST00000492793 STRA6Q9BX79 667 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 MAK16Q9BXY0 300 aaKnown RBP4.07□□□□□ -1.76
CLK1-213ENST00000492793 GHITMQ9H3K2 345 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 HIF1ANQ9NWT6 349 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 ADD3Q9UEY8 706 aaKnown RBP4.07□□□□□ -1.76
CLK1-213ENST00000492793 TBC1D29Q9UFV1 150 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 SWAP70Q9UH65 585 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 MTMR6Q9Y217 621 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 R3HDM2Q9Y2K5 976 aaKnown RBP4.07□□□□□ -1.76
CLK1-213ENST00000492793 ADAM18Q9Y3Q7 739 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 CEPT1Q9Y6K0 416 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 EVPLQ92817 2033 aa4.07□□□□□ -1.76
CLK1-213ENST00000492793 A0A1B0GVM2 712 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 A0A1W2PRG0 241 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 TMEM202A6NGA9 273 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 MYMKA6NI61 221 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 OVOL3O00110 214 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 VILLO15195 856 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 RGS14O43566 566 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 NDUFS3O75489 264 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 BMP15O95972 392 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 G6PDP11413 515 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 CD58P19256 250 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 AGAP20933 346 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 BDNFP23560 247 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 MCM3P25205 808 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 HADHAP40939 763 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 RFX5P48382 616 aaPredicted RBP4.06□□□□□ -1.76
CLK1-213ENST00000492793 NUDT6P53370 316 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 MC1RQ01726 317 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 ROR2Q01974 943 aaKnown RBP4.06□□□□□ -1.76
CLK1-213ENST00000492793 NIPAL4Q0D2K0 466 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 ST3GAL1Q11201 340 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 GPS2Q13227 327 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 CTTNQ14247 550 aaKnown RBP4.06□□□□□ -1.76
CLK1-213ENST00000492793 WTAPQ15007 396 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 TOMM20Q15388 145 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 MEA1Q16626 185 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 SGO1Q5FBB7 561 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 ZNF425Q6IV72 752 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 QSOX2Q6ZRP7 698 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 DSELQ8IZU8 1212 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 SRBD1Q8N5C6 995 aaKnown RBP4.06□□□□□ -1.76
CLK1-213ENST00000492793 C1orf131Q8NDD1 294 aaKnown RBP4.06□□□□□ -1.76
CLK1-213ENST00000492793 OIT3Q8WWZ8 545 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 SNAPC3Q92966 411 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 CALML4Q96GE6 196 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 URB1-AS1Q96HZ7 61 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 C1orf74Q96LT6 269 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 FCRL4Q96PJ5 515 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 NUDT16L1Q9BRJ7 211 aaKnown RBP4.06□□□□□ -1.76
CLK1-213ENST00000492793 IFIH1Q9BYX4 1025 aaKnown RBP4.06□□□□□ -1.76
CLK1-213ENST00000492793 CLK4Q9HAZ1 481 aaKnown RBP4.06□□□□□ -1.76
CLK1-213ENST00000492793 RANGRFQ9HD47 186 aaPredicted RBP4.06□□□□□ -1.76
CLK1-213ENST00000492793 DDX4Q9NQI0 724 aaKnown RBP4.06□□□□□ -1.76
CLK1-213ENST00000492793 IL36RNQ9UBH0 155 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 SLCO3A1Q9UIG8 710 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 NFE2L3Q9Y4A8 694 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 MAU2Q9Y6X3 613 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 PCSK5Q92824 1860 aa4.06□□□□□ -1.76
CLK1-213ENST00000492793 RSF1Q96T23 1441 aaPredicted RBP4.05□□□□□ -1.76
CLK1-213ENST00000492793 BTBD18B2RXH4 712 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 INAFM1C9JVW0 142 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 TIMM23O14925 209 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 SPRY3O43610 288 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 TSPAN9O75954 239 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 LCATP04180 440 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 FGF2P09038 288 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 HOXB2P14652 356 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 CDH2P19022 906 aaPredicted RBP4.05□□□□□ -1.76
CLK1-213ENST00000492793 GNLYP22749 145 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 CHATP28329 748 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 C21orf33P30042 268 aaPredicted RBP4.05□□□□□ -1.76
CLK1-213ENST00000492793 HOXD3P31249 432 aaPredicted RBP4.05□□□□□ -1.76
CLK1-213ENST00000492793 CLCN3P51790 818 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 CDH8P55286 799 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 CHAF1BQ13112 559 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 CUL4AQ13619 759 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 HNF4GQ14541 408 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 C2orf68Q2NKX9 166 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 CXorf66Q5JRM2 361 aaPredicted RBP4.05□□□□□ -1.76
CLK1-213ENST00000492793 C6orf141Q5SZD1 244 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 SPATA1Q5VX52 437 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 ZNF549Q6P9A3 640 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 SARM1Q6SZW1 724 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 B3GNT6Q6ZMB0 384 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 CHST9Q7L1S5 443 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 LINGO2Q7L985 606 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 FJX1Q86VR8 437 aa4.05□□□□□ -1.76
CLK1-213ENST00000492793 TAGAPQ8N103 731 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms