RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 PRLP01236 227 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 PTMAP06454 111 aaKnown RBP17.39■□□□□ 0.38
MDC1-206ENST00000489540 EPHA8P29322 1005 aaPredicted RBP17.39■□□□□ 0.38
MDC1-206ENST00000489540 HNF1BP35680 557 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 ATP5OP48047 213 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 THOP1P52888 689 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 WASHC5Q12768 1159 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 ACOX1Q15067 660 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 NOMO1Q15155 1222 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 TRIP6Q15654 476 aaKnown RBP17.39■□□□□ 0.38
MDC1-206ENST00000489540 CNGA3Q16281 694 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 TTC13Q8NBP0 860 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 ACTL9Q8TC94 416 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 HTR3CQ8WXA8 447 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 CAMK1GQ96NX5 476 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 HERPUD2Q9BSE4 406 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 CEP41Q9BYV8 373 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 LZTFL1Q9NQ48 299 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 TRHDEQ9UKU6 1024 aa17.39■□□□□ 0.38
MDC1-206ENST00000489540 TRPM6Q9BX84 2022 aa17.39■□□□□ 0.37
MDC1-206ENST00000489540 ASCC3Q8N3C0 2202 aaKnown RBP17.39■□□□□ 0.37
MDC1-206ENST00000489540 A0A0J9YYE9 177 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 GOLGA6L9A6NEM1 432 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 ZNF189O75820 626 aaPredicted RBP17.38■□□□□ 0.37
MDC1-206ENST00000489540 TRBC1P01850 177 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 CTPS1P17812 591 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 OTUD4Q01804 1114 aaKnown RBP17.38■□□□□ 0.37
MDC1-206ENST00000489540 BNIP3Q12983 259 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 ZNF211Q13398 564 aaPredicted RBP17.38■□□□□ 0.37
MDC1-206ENST00000489540 MTM1Q13496 603 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 FZD2Q14332 565 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 INPP5AQ14642 412 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 AADACL2Q6P093 401 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 PARGQ86W56 976 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 GATAD2AQ86YP4 633 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 LPCAT1Q8NF37 534 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 TADA1Q96BN2 335 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 COQ10AQ96MF6 247 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 ALS2CR12Q96Q35 445 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 RBM15Q96T37 977 aaKnown RBP eCLIP17.38■□□□□ 0.37
MDC1-206ENST00000489540 KLHL8Q9P2G9 620 aaPredicted RBP17.38■□□□□ 0.37
MDC1-206ENST00000489540 PLXNA2O75051 1894 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 NPIPB15A6NHN6 443 aaPredicted RBP17.38■□□□□ 0.37
MDC1-206ENST00000489540 ANKRD66B4E2M5 251 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 CSF2P04141 144 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 ZNF30P17039 623 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 LHCGRP22888 699 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 EIF3EP60228 445 aaKnown RBP17.38■□□□□ 0.37
MDC1-206ENST00000489540 HNRNPKP61978 463 aaKnown RBP eCLIP17.38■□□□□ 0.378e-11■■■■□ 24
MDC1-206ENST00000489540 SIM1P81133 766 aaPredicted RBP17.38■□□□□ 0.37
MDC1-206ENST00000489540 N4BP2L1Q5TBK1 243 aaPredicted RBP17.38■□□□□ 0.37
MDC1-206ENST00000489540 CRTC1Q6UUV9 634 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 PID1Q7Z2X4 250 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 GLRX5Q86SX6 157 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 CDKL3Q8IVW4 592 aaPredicted RBP17.38■□□□□ 0.37
MDC1-206ENST00000489540 RAVER1Q8IY67 606 aaKnown RBP17.38■□□□□ 0.37
MDC1-206ENST00000489540 LYSMD1Q96S90 227 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 APOOQ9BUR5 198 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 DNAJC28Q9NX36 388 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 PPP2R2CQ9Y2T4 447 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 DNAH14Q0VDD8 3507 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 ADAMTS9Q9P2N4 1935 aa17.38■□□□□ 0.37
MDC1-206ENST00000489540 CNOT1A5YKK6 2376 aaKnown RBP17.37■□□□□ 0.37
MDC1-206ENST00000489540 CAPN8A6NHC0 703 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 H3BM21 787 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 PCCBP05166 539 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 ADRB1P08588 477 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 ALPIP09923 528 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 RBP3P10745 1247 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 HTR1BP28222 390 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 RBL1P28749 1068 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 CDK18Q07002 472 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 RPS6KA1Q15418 735 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 QPCTQ16769 361 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 DENND2CQ68D51 928 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 CCDC70Q6NSX1 233 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 DARS2Q6PI48 645 aaKnown RBP17.37■□□□□ 0.37
MDC1-206ENST00000489540 ZNF567Q8N184 647 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 ATL2Q8NHH9 583 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 BAHD1Q8TBE0 780 aaPredicted RBP17.37■□□□□ 0.37
MDC1-206ENST00000489540 NUS1Q96E22 293 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 FCRL5Q96RD9 977 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 MLPHQ9BV36 600 aaPredicted RBP17.37■□□□□ 0.37
MDC1-206ENST00000489540 FAM153AQ9UHL3 310 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 BTBD3Q9Y2F9 522 aa17.37■□□□□ 0.37
MDC1-206ENST00000489540 DCHS1Q96JQ0 3298 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 SPAARA0A1B0GVQ0 90 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 MED19A0JLT2 244 aaPredicted RBP17.36■□□□□ 0.37
MDC1-206ENST00000489540 NEMP2A6NFY4 417 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 PIAS2O75928 621 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 STK10O94804 968 aaKnown RBP17.36■□□□□ 0.37
MDC1-206ENST00000489540 HOXC4P09017 264 aaPredicted RBP17.36■□□□□ 0.37
MDC1-206ENST00000489540 NME1P15531 152 aaKnown RBP17.36■□□□□ 0.37
MDC1-206ENST00000489540 GM2AP17900 193 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 DGKAP23743 735 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 CD68P34810 354 aaPredicted RBP17.36■□□□□ 0.37
MDC1-206ENST00000489540 TRIM23P36406 574 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 PTSQ03393 145 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 PTPRRQ15256 657 aa17.36■□□□□ 0.37
MDC1-206ENST00000489540 MEI1Q5TIA1 1274 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms