RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 TEX33O43247 280 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 TIMM44O43615 452 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 SH3BP5O60239 455 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 FOXD2O60548 495 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 OPHN1O60890 802 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 SRGAP2O75044 1071 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 RNASEH2AO75792 299 aaKnown RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 KRT37O76014 449 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 ENDOD1O94919 500 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 SEMA4FO95754 770 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 MT-CO1P00395 513 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 IL1BP01584 269 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 C1QTNF9P0C862 333 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 CD59P13987 128 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 PMLP29590 882 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 CDH5P33151 784 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 SOX5P35711 763 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 MATKP42679 507 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 MAPKAPK2P49137 400 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 JAM2P57087 298 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 PPP2CBP62714 309 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 SUMO1P63165 101 aaKnown RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 PPP2CAP67775 309 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 PRR5P85299 388 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 ECT2LQ008S8 904 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 UBXN1Q04323 297 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 DEUP1Q05D60 604 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 STX1AQ16623 288 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 MEA1Q16626 185 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 HNRNPA1L2Q32P51 320 aaKnown RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 ACCSLQ4AC99 568 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 ANO6Q4KMQ2 910 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 WDR45BQ5MNZ6 344 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 MPP7Q5T2T1 576 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 SYCP2LQ5T4T6 812 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 RNF219Q5W0B1 726 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 ZNF776Q68DI1 518 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 SASS6Q6UVJ0 657 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 LEKR1Q6ZMV7 388 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 BEND5Q7L4P6 421 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 APTXQ7Z2E3 356 aaKnown RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 MARCH9Q86YJ5 346 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 CCDC117Q8IWD4 279 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 SCUBE1Q8IWY4 988 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 HDDC3Q8N4P3 179 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 AADATQ8N5Z0 425 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 PNPLA1Q8N8W4 532 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 ZNF397Q8NF99 534 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 OR7D4Q8NG98 312 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 BIRC7Q96CA5 298 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 C18orf8Q96DM3 657 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 ALG14Q96F25 216 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 FAM81BQ96LP2 452 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 NOX5Q96PH1 765 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 PSMB7Q99436 277 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 NPY6RQ99463 290 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 DDX50Q9BQ39 737 aaKnown RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 DHRS4Q9BTZ2 278 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 NUP58Q9BVL2 599 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 KRTAP9-2Q9BYQ4 174 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 STK33Q9BYT3 514 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 BTBD1Q9H0C5 482 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 RSPH9Q9H1X1 276 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 NEUROG2Q9H2A3 272 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 PABPC3Q9H361 631 aaKnown RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 WDCPQ9H6R7 721 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 GAREM1Q9H706 876 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 ASNSD1Q9NWL6 643 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 FBXL12Q9NXK8 326 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 ARHGEF38Q9NXL2 777 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 SUN2Q9UH99 717 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 VPS28Q9UK41 221 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 SARDHQ9UL12 918 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 CA5BQ9Y2D0 317 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 SIK3Q9Y2K2 1263 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.05□□□□□ -1.44
CDHR3-213ENST00000488386 X6R8D5 127 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 CACNA1AO00555 2505 aa6.05□□□□□ -1.44
CDHR3-213ENST00000488386 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.04□□□□□ -1.44
CDHR3-213ENST00000488386 EDDM13A0A1B0GTR0 161 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 A0A1B0GTW7 788 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 A0A1B0GVM2 712 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 TCAF2A6NFQ2 919 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 TMCO5BA8MYB1 307 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 E9PAM4 449 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 FAM72CH0Y354 149 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 NPC1O15118 1278 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 SMAD6O43541 496 aaKnown RBP6.04□□□□□ -1.44
CDHR3-213ENST00000488386 RTN2O75298 545 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 GJB3O75712 270 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 MOCS3O95396 460 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 IGLV3-19P01714 112 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 ASLP04424 464 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 WNT1P04628 370 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 CYP1A1P04798 512 aaPredicted RBP6.04□□□□□ -1.44
CDHR3-213ENST00000488386 IGHV4-34P06331 123 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 CTSLP07711 333 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 RHOCP08134 193 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 GNSP15586 552 aa6.04□□□□□ -1.44
CDHR3-213ENST00000488386 CDK11BP21127 795 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms