RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 HEBP1Q9NRV9 189 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 PAG1Q9NWQ8 432 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 GOLGA6AQ9NYA3 693 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 ZNF212Q9UDV6 495 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 STEAP1Q9UHE8 339 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 HPSEQ9Y251 543 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 ABCA12Q86UK0 2595 aa5.06□□□□□ -1.6
BRCA1-217ENST00000487825 PLXND1Q9Y4D7 1925 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 TSPY2A6NKD2 308 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 A8MVJ9 347 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 H0Y626 953 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 SOCS2O14508 198 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 PRAMEF2O60811 474 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 RPS6KA5O75582 802 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 TRIM16O95361 564 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 PRF1P14222 555 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 RHCEP18577 417 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 HOXA6P31267 233 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 TDO2P48775 406 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 HSD17B4P51659 736 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 RHDQ02161 417 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 ZNF543Q08ER8 600 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 MAPK7Q13164 816 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 FHL1Q13642 323 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 GBX1Q14549 363 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 GFOD2Q3B7J2 385 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 CLLU1OSQ5K130 101 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 STOX1Q6ZVD7 989 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 CACNA2D4Q7Z3S7 1137 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 IRF2BP2Q7Z5L9 587 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 KBTBD6Q86V97 674 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 FSTL5Q8N475 847 aaPredicted RBP5.05□□□□□ -1.6
BRCA1-217ENST00000487825 SPEM1Q8N4L4 309 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 PNPLA1Q8N8W4 532 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 FAM71DQ8N9W8 422 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 DEFB124Q8NES8 71 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 PIGOQ8TEQ8 1089 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 DNASE1L2Q92874 299 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 SNX22Q96L94 193 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 SIGLEC11Q96RL6 698 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 ZDHHC7Q9NXF8 308 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 OBP2AQ9NY56 170 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 ERAP1Q9NZ08 941 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 STK39Q9UEW8 545 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 VPS51Q9UID3 782 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 CDH7Q9ULB5 785 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 NDRG2Q9UN36 371 aaKnown RBP5.05□□□□□ -1.6
BRCA1-217ENST00000487825 SNX13Q9Y5W8 968 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 C2CD3Q4AC94 2353 aa5.05□□□□□ -1.6
BRCA1-217ENST00000487825 BAZ2BQ9UIF8 2168 aaKnown RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 A0A087WV48 116 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 RRN3P2A6NIE6 340 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 CDX4O14627 284 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 ZC3H11AO75152 810 aaKnown RBP eCLIP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 RPP40O75818 363 aaKnown RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 NTN1O95631 604 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 GLUD1P00367 558 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 TMEM225BP0DP42 221 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 SNHG28P0DPA3 235 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 CHRNB1P11230 501 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 ADRA1DP25100 572 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 MARK3P27448 753 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 RBL1P28749 1068 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 CCND2P30279 289 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 TCF7P36402 384 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 TXNL4AP83876 142 aaKnown RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 DDX10Q13206 875 aaKnown RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 SEMA5AQ13591 1074 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 LAMB3Q13751 1172 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 GALEQ14376 348 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 CDC37Q16543 378 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 C10orf25Q5T742 122 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 RRAGBQ5VZM2 374 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 MZT2AQ6P582 158 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 RNF44Q7L0R7 432 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 FAM228AQ86W67 206 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 ECHDC2Q86YB7 292 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 P3H2Q8IVL5 708 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 NME8Q8N427 588 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 TTC8Q8TAM2 541 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 HDAC7Q8WUI4 952 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 RSPH1Q8WYR4 309 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 FGF13Q92913 245 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 PRR11Q96HE9 360 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 INPP4AQ96PE3 977 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 KXD1Q9BQD3 176 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 NT5C3AQ9H0P0 336 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 LMAN1LQ9HAT1 526 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 TMEM9BQ9NQ34 198 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 GAR1Q9NY12 217 aaKnown RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 MRPL11Q9Y3B7 192 aaKnown RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 NUP210Q8TEM1 1887 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-217ENST00000487825 PCDH15Q96QU1 1955 aa5.04□□□□□ -1.6
BRCA1-217ENST00000487825 FBN2P35556 2912 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 FRMPD4Q14CM0 1322 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 GOLGA4Q13439 2230 aaKnown RBP5.03□□□□□ -1.6
BRCA1-217ENST00000487825 SPAARA0A1B0GVQ0 90 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 TEX28O15482 410 aa5.03□□□□□ -1.6
BRCA1-217ENST00000487825 FIBPO43427 364 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms