RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CCDC6Q16204 474 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 ZNF667Q5HYK9 610 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 STXBP5Q5T5C0 1151 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 IRAK1BP1Q5VVH5 260 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 PLEKHA7Q6IQ23 1121 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 FAM122CQ6P4D5 195 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 MTSS1LQ765P7 747 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 DGLUCYQ7Z3D6 616 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 HERC6Q8IVU3 1022 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 FTSJ3Q8IY81 847 aaKnown RBP4.13□□□□□ -1.75
SMC4-219ENST00000487747 ZNF34Q8IZ26 560 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 SLC24A4Q8NFF2 622 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 ABTB1Q969K4 478 aaPredicted RBP4.13□□□□□ -1.75
SMC4-219ENST00000487747 OTULINQ96BN8 352 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 C17orf75Q9HAS0 396 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 SMYD2Q9NRG4 433 aa4.13□□□□□ -1.75
SMC4-219ENST00000487747 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 A0A1B0GVY2 172 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 FAM72CH0Y354 149 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 IFNL4K9M1U5 179 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 CAPN9O14815 690 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 CYC1P08574 325 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 CD53P19397 219 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 CHATP28329 748 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 FMO5P49326 533 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 NR0B1P51843 470 aaKnown RBP4.12□□□□□ -1.75
SMC4-219ENST00000487747 NEDD9Q14511 834 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 NAA25Q14CX7 972 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 EIF2S3LQ2VIR3 472 aaKnown RBP4.12□□□□□ -1.75
SMC4-219ENST00000487747 FAM72AQ5TYM5 149 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 FAM72DQ6L9T8 149 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 FAM160B2Q86V87 743 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 FAM72BQ86X60 149 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 WDR63Q8IWG1 891 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 CCDC146Q8IYE0 955 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 ZNF485Q8NCK3 441 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 KCNH5Q8NCM2 988 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 TAS1R2Q8TE23 839 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 TRAPPC12Q8WVT3 735 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 PAGR1Q9BTK6 254 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 PLEKHA5Q9HAU0 1116 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 MKKSQ9NPJ1 570 aaPredicted RBP4.12□□□□□ -1.75
SMC4-219ENST00000487747 POU2F3Q9UKI9 436 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 RCOR1Q9UKL0 485 aa4.12□□□□□ -1.75
SMC4-219ENST00000487747 PCNAP12004 261 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 ETFAP13804 333 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 S1PR1P21453 382 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 DDIT3P35638 169 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 TMPOP42166 694 aaKnown RBP4.11□□□□□ -1.75
SMC4-219ENST00000487747 YWHAZP63104 245 aaKnown RBP4.11□□□□□ -1.75
SMC4-219ENST00000487747 SREBF2Q12772 1141 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 SGO1Q5FBB7 561 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 KCNT1Q5JUK3 1230 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 HIST2H2BDQ6DRA6 164 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 SLC36A4Q6YBV0 504 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 NFE4Q86UQ8 179 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.11□□□□□ -1.755e-13■■■■■ 220.5
SMC4-219ENST00000487747 C1orf87Q8N0U7 546 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 AGBL3Q8NEM8 1001 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 OR2AK2Q8NG84 335 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 SPPL3Q8TCT6 385 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 SH3KBP1Q96B97 665 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 COG8Q96MW5 612 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 LITAFQ99732 161 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 SNTG1Q9NSN8 517 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 TMEM30AQ9NV96 361 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 PEMTQ9UBM1 199 aa4.11□□□□□ -1.75
SMC4-219ENST00000487747 MTA2O94776 668 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 CNPP09543 421 aaKnown RBP4.1□□□□□ -1.75
SMC4-219ENST00000487747 IL15P40933 162 aaPredicted RBP4.1□□□□□ -1.75
SMC4-219ENST00000487747 EFNA5P52803 228 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 CTF1Q16619 201 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 TMEM30BQ3MIR4 351 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 SERTAD4-AS1Q5TG53 156 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 RGMBQ6NW40 437 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 FBXO46Q6PJ61 603 aaPredicted RBP4.1□□□□□ -1.75
SMC4-219ENST00000487747 KRBA2Q6ZNG9 492 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 GPAT4Q86UL3 456 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 PLD5Q8N7P1 536 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 RUFY2Q8WXA3 655 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 PCYT2Q99447 389 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 EYA3Q99504 573 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 PHF7Q9BWX1 381 aaPredicted RBP4.1□□□□□ -1.75
SMC4-219ENST00000487747 PCDH9Q9HC56 1237 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 RASSF1Q9NS23 344 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 BABAM1Q9NWV8 329 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 PADI1Q9ULC6 663 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 CARD8Q9Y2G2 431 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 STON1Q9Y6Q2 735 aa4.1□□□□□ -1.75
SMC4-219ENST00000487747 LILRA5A6NI73 299 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 BCAT2O15382 392 aaPredicted RBP4.09□□□□□ -1.75
SMC4-219ENST00000487747 MYOD1P15172 320 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 AGAP20933 346 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 KRTAP10-3P60369 221 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 SEC61BP60468 96 aaKnown RBP4.09□□□□□ -1.75
SMC4-219ENST00000487747 C2orf68Q2NKX9 166 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 ARHGAP17Q68EM7 881 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 MYPOPQ86VE0 399 aaPredicted RBP4.09□□□□□ -1.75
SMC4-219ENST00000487747 SLC35F3Q8IY50 421 aa4.09□□□□□ -1.75
SMC4-219ENST00000487747 SCCPDHQ8NBX0 429 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms