RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	TMEM202	A6NGA9	273 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	TNFRSF10C	O14798	259 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	HTRA2	O43464	458 aa	Predicted RBP	12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	MAFK	O60675	156 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	PEX11B	O96011	259 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	CP	P00450	1065 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	CYP2A6	P11509	494 aa	Predicted RBP	12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	KRT10	P13645	584 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	VIPR1	P32241	457 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	PBX1	P40424	430 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	MMP13	P45452	471 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	TLE3	Q04726	772 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	RALGPS1	Q5JS13	557 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	DENND2C	Q68D51	928 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	TXNRD3NB	Q6F5E7	133 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	ALKBH5	Q6P6C2	394 aa	Known RBP	12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	GPR155	Q7Z3F1	870 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	LRRC49	Q8IUZ0	686 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	FAM46D	Q8NEK8	389 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	KCNE4	Q8WWG9	221 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	CCDC74A	Q96AQ1	378 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	NUS1	Q96E22	293 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	PDXP	Q96GD0	296 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	HIC2	Q96JB3	615 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	NSMCE3	Q96MG7	304 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	GFM1	Q96RP9	751 aa	Known RBP	12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	MGME1	Q9BQP7	344 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	CYP4F12	Q9HCS2	524 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	RCOR3	Q9P2K3	495 aa	Predicted RBP	12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	PHTF1	Q9UMS5	762 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	ENTPD2	Q9Y5L3	495 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	PLXNB3	Q9ULL4	1909 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401	TMEM131	Q92545	1883 aa		12.48	□□□□□ -0.41
SREBF1-215	ENST00000487401		A0A087X0T9	212 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	TMX2-CTNND1	H3BSU7	103 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	HEXIM1	O94992	359 aa	Known RBP	12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	TPM3	P06753	285 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	FAM228B	P0C875	321 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	CR2	P20023	1033 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	DEK	P35659	375 aa	Known RBP	12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	TRIM23	P36406	574 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	UCN	P55089	124 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	MAX	P61244	160 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	CXADR	P78310	365 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	CCL7	P80098	99 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	SLC25A11	Q02978	314 aa	Known RBP	12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	ITK	Q08881	620 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	ARHGEF7	Q14155	803 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	TSR1	Q2NL82	804 aa	Known RBP	12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	ARMC12	Q5T9G4	340 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	NYAP1	Q6ZVC0	841 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	USP45	Q70EL2	814 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	NDUFAF2	Q8N183	169 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	PGBD5	Q8N414	524 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	ARL14	Q8N4G2	192 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401		Q8N9G6	341 aa	Predicted RBP	12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	KCTD6	Q8NC69	237 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	WDR36	Q8NI36	951 aa	Known RBP	12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	SPOCK2	Q92563	424 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	CCDC97	Q96F63	343 aa	Predicted RBP	12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	COQ10A	Q96MF6	247 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	SLC46A1	Q96NT5	459 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	BBC3	Q96PG8	261 aa	Predicted RBP	12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	DPH1	Q9BZG8	443 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	STRADB	Q9C0K7	418 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	FGF22	Q9HCT0	170 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	NT5M	Q9NPB1	228 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	ASCL3	Q9NQ33	180 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	MRPL40	Q9NQ50	206 aa	Known RBP	12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	PHPT1	Q9NRX4	125 aa	Predicted RBP	12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	IFNK	Q9P0W0	207 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	PCDHGA8	Q9Y5G5	932 aa		12.47	□□□□□ -0.41
SREBF1-215	ENST00000487401	CCDC187	A0A096LP49	1063 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	GOLGA6C	A6NDK9	693 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	GOLGA6B	A6NDN3	693 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	NTN3	O00634	580 aa	Predicted RBP	12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	KLK10	O43240	276 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	TNFSF15	O95150	251 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	PGLS	O95336	258 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	RPLP0	P05388	317 aa	Known RBP	12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	GOLGA6D	P0CG33	693 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	GM2A	P17900	193 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	GJC1	P36383	396 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	ETV3	P41162	512 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	TRAF2	Q12933	501 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	MMRN1	Q13201	1228 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	CNGA3	Q16281	694 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	KCTD16	Q68DU8	428 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	IGF2-AS	Q6U949	168 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	MAP7D3	Q8IWC1	876 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	GPR156	Q8NFN8	814 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	ZNF564	Q8TBZ8	553 aa	Predicted RBP	12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	SCRN2	Q96FV2	425 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	LGR4	Q9BXB1	951 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	TMEM168	Q9H0V1	697 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	DPEP2	Q9H4A9	486 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	SUDS3	Q9H7L9	328 aa	Predicted RBP	12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	EPB41L5	Q9HCM4	733 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	HAUS2	Q9NVX0	235 aa		12.46	□□□□□ -0.41
SREBF1-215	ENST00000487401	GOLGA6A	Q9NYA3	693 aa		12.46	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms