RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 RBMXL3Q8N7X1 1067 aaKnown RBP8.3□□□□□ -1.08
XRN1-212ENST00000486211 TFAP2BQ92481 460 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 PNPLA2Q96AD5 504 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 C7orf25Q9BPX7 421 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 C1QTNF7Q9BXJ2 289 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 CEP44Q9C0F1 390 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 MIS12Q9H081 205 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 KCTD10Q9H3F6 313 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 ZDHHC6Q9H6R6 413 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 GDPD2Q9HCC8 539 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 SLAMF7Q9NQ25 335 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 RAB6BQ9NRW1 208 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 SPATS2LQ9NUQ6 558 aaKnown RBP8.3□□□□□ -1.08
XRN1-212ENST00000486211 ASF1BQ9NVP2 202 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 VANGL2Q9ULK5 521 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 TACC2O95359 2948 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 DCHS2Q6V1P9 2916 aa8.3□□□□□ -1.08
XRN1-212ENST00000486211 TMEM202A6NGA9 273 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 PPM1DO15297 605 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 INPP4BO15327 924 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 LRCH4O75427 683 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 CREG1O75629 220 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 CD160O95971 181 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 NR3C1P04150 777 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 FGF1P05230 155 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 VDRP11473 427 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 CD19P15391 556 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 ZNF28P17035 718 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 CASP1P29466 404 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 RPL34P49207 117 aaKnown RBP8.29□□□□□ -1.08
XRN1-212ENST00000486211 CDH4P55283 916 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 ITGA1P56199 1179 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 RNASE9P60153 205 aaKnown RBP8.29□□□□□ -1.08
XRN1-212ENST00000486211 CHAF1BQ13112 559 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 LRRC14Q15048 493 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 ALFQ53S48 1182 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 BRAPQ7Z569 592 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 NRROSQ86YC3 692 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 UBR7Q8N806 425 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 CCDC150Q8NCX0 1101 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 OR6K2Q8NGY2 324 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 ATL2Q8NHH9 583 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 KIAA1524Q8TCG1 905 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 PATE1Q8WXA2 126 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 FAM149B1Q96BN6 582 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 ARHGEF26Q96DR7 871 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 HSFY1Q96LI6 401 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 BARD1Q99728 777 aaKnown RBP8.29□□□□□ -1.08
XRN1-212ENST00000486211 DPYSL5Q9BPU6 564 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 LRRC27Q9C0I9 530 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 TWSG1Q9GZX9 223 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 TMEM8AQ9HCN3 771 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 COQ6Q9Y2Z9 468 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 PCDHGA6Q9Y5G7 932 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 ACTL7AQ9Y615 435 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 HS3ST4Q9Y661 456 aa8.29□□□□□ -1.08
XRN1-212ENST00000486211 PIPSLA2A3N6 862 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 A6NCN8 305 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 ZSCAN5CA6NGD5 496 aaPredicted RBP8.28□□□□□ -1.08
XRN1-212ENST00000486211 MAPK13O15264 365 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 LRRTM2O43300 516 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 DPM1O60762 260 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 ZG16O60844 167 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 CEACAM4O75871 244 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 ECEL1O95672 775 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 RHOCP08134 193 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 MAN1A1P33908 653 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 ARF5P84085 180 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 EFHC1Q5JVL4 640 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 ARTNQ5T4W7 220 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 ANKRD40Q6AI12 368 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 ZNF683Q8IZ20 524 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 OR7D4Q8NG98 312 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 OR56A4Q8NGH8 313 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 CXorf40AQ8TE69 158 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 ZDHHC1Q8WTX9 485 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 RNF31Q96EP0 1072 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 WRAP53Q9BUR4 548 aaKnown RBP8.28□□□□□ -1.08
XRN1-212ENST00000486211 TRIM8Q9BZR9 551 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 TM6SF2Q9BZW4 377 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 MMRN2Q9H8L6 949 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 SIDT1Q9NXL6 827 aaKnown RBP8.28□□□□□ -1.08
XRN1-212ENST00000486211 HECAQ9UBI9 543 aaPredicted RBP8.28□□□□□ -1.08
XRN1-212ENST00000486211 SLC12A6Q9UHW9 1150 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 ZNF451Q9Y4E5 1061 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 PCDHGB7Q9Y5F8 929 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 ANKRD36A6QL64 1941 aa8.28□□□□□ -1.08
XRN1-212ENST00000486211 M0QYV0 167 aa8.27□□□□□ -1.09
XRN1-212ENST00000486211 TNFRSF10CO14798 259 aa8.27□□□□□ -1.09
XRN1-212ENST00000486211 POLR1CO15160 346 aaPredicted RBP8.27□□□□□ -1.09
XRN1-212ENST00000486211 ZW10O43264 779 aa8.27□□□□□ -1.09
XRN1-212ENST00000486211 KATNA1O75449 491 aa8.27□□□□□ -1.09
XRN1-212ENST00000486211 IL2RAP01589 272 aa8.27□□□□□ -1.09
XRN1-212ENST00000486211 UGT2B4P06133 528 aa8.27□□□□□ -1.09
XRN1-212ENST00000486211 SLC2A3P11169 496 aa8.27□□□□□ -1.09
XRN1-212ENST00000486211 CCNB1P14635 433 aa8.27□□□□□ -1.09
XRN1-212ENST00000486211 CCR1P32246 355 aa8.27□□□□□ -1.09
XRN1-212ENST00000486211 DNA2P51530 1060 aa8.27□□□□□ -1.09
XRN1-212ENST00000486211 CCL11P51671 97 aa8.27□□□□□ -1.09
XRN1-212ENST00000486211 KIAA1024LP59773 190 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms