RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 PCDHGA12O60330 932 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 FZD6O60353 706 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 ZNF189O75820 626 aaPredicted RBP12.49□□□□□ -0.41
HMG20B-211ENST00000486028 KCNK5O95279 499 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 MMP2P08253 660 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 PDHA1P08559 390 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 CEACAM1P13688 526 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 PTPN3P26045 913 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 NOVA1P51513 510 aaKnown RBP12.49□□□□□ -0.41
HMG20B-211ENST00000486028 EIF3EP60228 445 aaKnown RBP12.49□□□□□ -0.41
HMG20B-211ENST00000486028 PFN3P60673 137 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 SKOR1P84550 965 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 OTUD4Q01804 1114 aaKnown RBP12.49□□□□□ -0.41
HMG20B-211ENST00000486028 WASHC5Q12768 1159 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 ARHGEF7Q14155 803 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 IHHQ14623 411 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 ACOX1Q15067 660 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 AGERQ15109 404 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 NOMO1Q15155 1222 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 RPS6KA1Q15418 735 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 WSCD2Q2TBF2 565 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 INAVAQ3KP66 663 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 PPM1JQ5JR12 505 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 AADACL2Q6P093 401 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 MTERF4Q7Z6M4 381 aaKnown RBP12.49□□□□□ -0.41
HMG20B-211ENST00000486028 NAXDQ8IW45 347 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 TTC13Q8NBP0 860 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 DEFB124Q8NES8 71 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 ACTL9Q8TC94 416 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 SETD7Q8WTS6 366 aaKnown RBP12.49□□□□□ -0.41
HMG20B-211ENST00000486028 HTR3CQ8WXA8 447 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 TEKT5Q96M29 485 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 MCCC1Q96RQ3 725 aaPredicted RBP12.49□□□□□ -0.41
HMG20B-211ENST00000486028 HERPUD2Q9BSE4 406 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 TDRD1Q9BXT4 1180 aaKnown RBP12.49□□□□□ -0.41
HMG20B-211ENST00000486028 PCDH9Q9HC56 1237 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 KCTD5Q9NXV2 234 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 TRHDEQ9UKU6 1024 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 DNPEPQ9ULA0 475 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 COQ6Q9Y2Z9 468 aa12.49□□□□□ -0.41
HMG20B-211ENST00000486028 CACNA1AO00555 2505 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 NPIPB15A6NHN6 443 aaPredicted RBP12.48□□□□□ -0.41
HMG20B-211ENST00000486028 DYNC1I1O14576 645 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 FLRT2O43155 660 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 RECQL5O94762 991 aaPredicted RBP12.48□□□□□ -0.41
HMG20B-211ENST00000486028 STK10O94804 968 aaKnown RBP12.48□□□□□ -0.41
HMG20B-211ENST00000486028 HEXIM1O94992 359 aaKnown RBP12.48□□□□□ -0.41
HMG20B-211ENST00000486028 PRLP01236 227 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 ITGAVP06756 1048 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 CTPS1P17812 591 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 HNF1BP35680 557 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 IGFALSP35858 605 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 THOP1P52888 689 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 YPEL5P62699 121 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 IL9RQ01113 521 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 PTK2BQ14289 1009 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 IRF4Q15306 451 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 SLC14A2Q15849 920 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 MEI1Q5TIA1 1274 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 CCDC70Q6NSX1 233 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 PSAPL1Q6NUJ1 521 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 DARS2Q6PI48 645 aaKnown RBP12.48□□□□□ -0.41
HMG20B-211ENST00000486028 DBX2Q6ZNG2 339 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 PID1Q7Z2X4 250 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 CDKL3Q8IVW4 592 aaPredicted RBP12.48□□□□□ -0.41
HMG20B-211ENST00000486028 TP53I13Q8NBR0 393 aaPredicted RBP12.48□□□□□ -0.41
HMG20B-211ENST00000486028 LPCAT1Q8NF37 534 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 IFT43Q96FT9 208 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 COQ10AQ96MF6 247 aa12.48□□□□□ -0.41
HMG20B-211ENST00000486028 RBM15Q96T37 977 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMG20B-211ENST00000486028 MBNL1Q9NR56 388 aaKnown RBP12.48□□□□□ -0.41
HMG20B-211ENST00000486028 KLHL8Q9P2G9 620 aaPredicted RBP12.48□□□□□ -0.41
HMG20B-211ENST00000486028 PCNX2A6NKB5 2137 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 DCHS1Q96JQ0 3298 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 A0A0J9YYE9 177 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 SPTY2D1-AS1A0A0U1RR47 76 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 GOLGA8CPA6NN73 597 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 PSMD11O00231 422 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 TRBC1P01850 177 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 ALPIP09923 528 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 RBP3P10745 1247 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 RBL1P28749 1068 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 GRK6P43250 576 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 PDE1CQ14123 709 aaPredicted RBP12.47□□□□□ -0.41
HMG20B-211ENST00000486028 INPP5AQ14642 412 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 SHBQ15464 509 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 CNGA3Q16281 694 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 DENND2CQ68D51 928 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 CRTC1Q6UUV9 634 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 SLC22A18ASQ8N1D0 253 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 CBARPQ8N350 705 aaPredicted RBP12.47□□□□□ -0.41
HMG20B-211ENST00000486028 PIP4P2Q8N4L2 257 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 TRIM58Q8NG06 486 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 SPATA22Q8NHS9 363 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 RHBDD1Q8TEB9 315 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 TADA1Q96BN2 335 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 CAMK1GQ96NX5 476 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 CDC6Q99741 560 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 MLPHQ9BV36 600 aaPredicted RBP12.47□□□□□ -0.41
HMG20B-211ENST00000486028 GPR27Q9NS67 375 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms