RNA–Protein interactions for RNA: ENST00000485027.5

KPNA1-208, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-208ENST00000485027 VEPH1Q14D04 833 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 SLC39A14Q15043 492 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 C6orf163Q5TEZ5 329 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 STRIP1Q5VSL9 837 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 PLA2G4FQ68DD2 849 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 MIS18BP1Q6P0N0 1132 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 AAGABQ6PD74 315 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 GPRIN1Q7Z2K8 1008 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 TRABD2AQ86V40 505 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 DENND6AQ8IWF6 608 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 REXO1L1PQ8IX06 675 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 KRT222Q8N1A0 295 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 EZH1Q92800 747 aaPredicted RBP6.17□□□□□ -1.42
KPNA1-208ENST00000485027 INPP5DQ92835 1189 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 TMEM186Q96B77 213 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 HDAC11Q96DB2 347 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 C19orf60Q96EN9 201 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 C11orf24Q96F05 449 aaPredicted RBP6.17□□□□□ -1.42
KPNA1-208ENST00000485027 ELMOD3Q96FG2 381 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 PRR11Q96HE9 360 aaPredicted RBP6.17□□□□□ -1.42
KPNA1-208ENST00000485027 PGAM5Q96HS1 289 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 USP28Q96RU2 1077 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.17□□□□□ -1.42
KPNA1-208ENST00000485027 GON7Q9BXV9 100 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 MRPL1Q9BYD6 325 aaKnown RBP6.17□□□□□ -1.42
KPNA1-208ENST00000485027 TMPRSS13Q9BYE2 586 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 CTDSP1Q9GZU7 261 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 GOLPH3LQ9H4A5 285 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 USP29Q9HBJ7 922 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 TUFT1Q9NNX1 390 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 ARL8BQ9NVJ2 186 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 SIDT1Q9NXL6 827 aaKnown RBP6.17□□□□□ -1.42
KPNA1-208ENST00000485027 CRNNQ9UBG3 495 aaPredicted RBP6.17□□□□□ -1.42
KPNA1-208ENST00000485027 POLKQ9UBT6 870 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 CDH22Q9UJ99 828 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 DBR1Q9UK59 544 aaKnown RBP6.17□□□□□ -1.42
KPNA1-208ENST00000485027 ACTL7AQ9Y615 435 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 ADAMTS7Q9UKP4 1686 aa6.17□□□□□ -1.42
KPNA1-208ENST00000485027 TRAV6A0A075B6T7 132 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 TRIM49BA6NDI0 452 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 FAM90A8PA6NJQ4 464 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 MYO1CO00159 1063 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 PSMD9O00233 223 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 RANBP6O60518 1105 aaKnown RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 SURF6O75683 361 aaKnown RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 RGS9O75916 674 aaPredicted RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 CELF2O95319 508 aaKnown RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 FAM90A13PP0C7W8 464 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 FAM90A24PP0C7X0 464 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 HSPA8P11142 646 aaKnown RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 HPGDP15428 266 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 CD68P34810 354 aaPredicted RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 BMI1P35226 326 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 RFC2P35250 354 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 RAB28P51157 221 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 ADCY7P51828 1080 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 CTXN1P60606 82 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 PPIGQ13427 754 aaKnown RBP eCLIP6.16□□□□□ -1.421e-7■■■□□ 15.2
KPNA1-208ENST00000485027 MTX1Q13505 466 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 EPC2Q52LR7 807 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 CCDC178Q5BJE1 867 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 STEAP3Q658P3 488 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 OR6B2Q6IFH4 312 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 SULT1C3Q6IMI6 304 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 KIAA1324Q6UXG2 1013 aaKnown RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 PTF1AQ7RTS3 328 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 SYVN1Q86TM6 617 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 L3MBTL4Q8NA19 623 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 CCNYQ8ND76 341 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 TMEM52Q8NDY8 209 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 AGBL3Q8NEM8 1001 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 OR9A1PQ8NGU1 263 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 SMARCE1Q969G3 411 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 AZIN2Q96A70 460 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 NECTIN4Q96NY8 510 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 LLPHQ9BRT6 129 aaKnown RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 WDR83Q9BRX9 315 aaKnown RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 KIFC3Q9BVG8 833 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 YIPF2Q9BWQ6 316 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 AMNQ9BXJ7 453 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 GSX1Q9H4S2 264 aaPredicted RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 CCDC134Q9H6E4 229 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 PARVGQ9HBI0 331 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 XPR1Q9UBH6 696 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 HSPB7Q9UBY9 170 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 TRMT6Q9UJA5 497 aaKnown RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 TCFL5Q9UL49 500 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 DNPEPQ9ULA0 475 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 ACTL7BQ9Y614 415 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 COMMD3-BMI1R4GMX3 469 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 NPC1L1Q9UHC9 1359 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 DLG5Q8TDM6 1919 aa6.16□□□□□ -1.42
KPNA1-208ENST00000485027 SIPA1L3O60292 1781 aaPredicted RBP6.16□□□□□ -1.42
KPNA1-208ENST00000485027 TARSL2A2RTX5 802 aaKnown RBP6.15□□□□□ -1.42
KPNA1-208ENST00000485027 WIPF3A6NGB9 483 aa6.15□□□□□ -1.42
KPNA1-208ENST00000485027 F8WDY8 70 aa6.15□□□□□ -1.42
KPNA1-208ENST00000485027 EIF3DO15371 548 aaKnown RBP eCLIP6.15□□□□□ -1.42
KPNA1-208ENST00000485027 PRAMEF4O60810 478 aa6.15□□□□□ -1.42
KPNA1-208ENST00000485027 IGHEP01854 428 aa6.15□□□□□ -1.42
KPNA1-208ENST00000485027 ALBP02768 609 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms