RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 CR2P20023 1033 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 KELP23276 732 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 CDH6P55285 790 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 PCBP4P57723 403 aaKnown RBP28.48■■■□□ 2.15
HLA-C-207ENST00000484378 C3orf38Q5JPI3 329 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 CCDC122Q5T0U0 273 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 OR56A4Q8NGH8 313 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 WDR48Q8TAF3 677 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 SPOCK2Q92563 424 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 GRAMD1AQ96CP6 724 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 LGMNQ99538 433 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 NOD2Q9HC29 1040 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 RCOR3Q9P2K3 495 aaPredicted RBP28.48■■■□□ 2.15
HLA-C-207ENST00000484378 DGKBQ9Y6T7 804 aa28.48■■■□□ 2.15
HLA-C-207ENST00000484378 SMG1Q96Q15 3661 aaKnown RBP28.48■■■□□ 2.15
HLA-C-207ENST00000484378 DXOO77932 396 aaKnown RBP28.47■■■□□ 2.15
HLA-C-207ENST00000484378 NFKBIAP25963 317 aa28.47■■■□□ 2.15
HLA-C-207ENST00000484378 MMP13P45452 471 aa28.47■■■□□ 2.15
HLA-C-207ENST00000484378 MAXP61244 160 aa28.47■■■□□ 2.15
HLA-C-207ENST00000484378 HADHQ16836 314 aaKnown RBP28.47■■■□□ 2.15
HLA-C-207ENST00000484378 MARC1Q5VT66 337 aa28.47■■■□□ 2.15
HLA-C-207ENST00000484378 KCTD16Q68DU8 428 aa28.47■■■□□ 2.15
HLA-C-207ENST00000484378 OR1E3Q8WZA6 343 aa28.47■■■□□ 2.15
HLA-C-207ENST00000484378 ATXN7L3BQ96GX2 97 aa28.47■■■□□ 2.15
HLA-C-207ENST00000484378 RBM15Q96T37 977 aaKnown RBP eCLIP28.47■■■□□ 2.15
HLA-C-207ENST00000484378 WDR26Q9H7D7 661 aa28.47■■■□□ 2.15
HLA-C-207ENST00000484378 FGF22Q9HCT0 170 aa28.47■■■□□ 2.15
HLA-C-207ENST00000484378 SATB2Q9UPW6 733 aa28.47■■■□□ 2.15
HLA-C-207ENST00000484378 SHROOM3Q8TF72 1996 aa28.46■■■□□ 2.15
HLA-C-207ENST00000484378 TMEM202A6NGA9 273 aa28.46■■■□□ 2.15
HLA-C-207ENST00000484378 GM2AP17900 193 aa28.46■■■□□ 2.15
HLA-C-207ENST00000484378 GJC1P36383 396 aa28.46■■■□□ 2.15
HLA-C-207ENST00000484378 COL9A2Q14055 689 aaPredicted RBP28.46■■■□□ 2.15
HLA-C-207ENST00000484378 SPIDRQ14159 915 aa28.46■■■□□ 2.15
HLA-C-207ENST00000484378 ZNF248Q8NDW4 579 aa28.46■■■□□ 2.15
HLA-C-207ENST00000484378 ZNF564Q8TBZ8 553 aaPredicted RBP28.46■■■□□ 2.15
HLA-C-207ENST00000484378 NUS1Q96E22 293 aa28.46■■■□□ 2.15
HLA-C-207ENST00000484378 ENTPD2Q9Y5L3 495 aa28.46■■■□□ 2.15
HLA-C-207ENST00000484378 BPTFQ12830 3046 aa28.45■■■□□ 2.15
HLA-C-207ENST00000484378 PTPRQQ9UMZ3 2332 aa28.45■■■□□ 2.14
HLA-C-207ENST00000484378 VIPR1P32241 457 aa28.45■■■□□ 2.14
HLA-C-207ENST00000484378 ERVPABLB-1P60509 514 aa28.45■■■□□ 2.14
HLA-C-207ENST00000484378 TRAF2Q12933 501 aa28.45■■■□□ 2.14
HLA-C-207ENST00000484378 MMRN1Q13201 1228 aa28.45■■■□□ 2.14
HLA-C-207ENST00000484378 CNGA3Q16281 694 aa28.45■■■□□ 2.14
HLA-C-207ENST00000484378 RALGPS1Q5JS13 557 aa28.45■■■□□ 2.14
HLA-C-207ENST00000484378 SPACA3Q8IXA5 215 aa28.45■■■□□ 2.14
HLA-C-207ENST00000484378 CCDC74AQ96AQ1 378 aa28.45■■■□□ 2.14
HLA-C-207ENST00000484378 NAF1Q96HR8 494 aaKnown RBP28.45■■■□□ 2.14
HLA-C-207ENST00000484378 COQ10AQ96MF6 247 aa28.45■■■□□ 2.14
HLA-C-207ENST00000484378 THSD1Q9NS62 852 aa28.45■■■□□ 2.14
HLA-C-207ENST00000484378 CASC3O15234 703 aaKnown RBP28.44■■■□□ 2.14
HLA-C-207ENST00000484378 TPM3P06753 285 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 HOXC4P09017 264 aaPredicted RBP28.44■■■□□ 2.14
HLA-C-207ENST00000484378 CD48P09326 243 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 CASP14P31944 242 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 TRIM23P36406 574 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 TLE3Q04726 772 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 DENND2CQ68D51 928 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 PNCKQ6P2M8 343 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 HIC2Q96JB3 615 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 PRORYQ9H606 182 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 NT5MQ9NPB1 228 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 ASCL3Q9NQ33 180 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 MRPL40Q9NQ50 206 aaKnown RBP28.44■■■□□ 2.14
HLA-C-207ENST00000484378 MOSPD1Q9UJG1 213 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 PHTF1Q9UMS5 762 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 RAI2Q9Y5P3 530 aa28.44■■■□□ 2.14
HLA-C-207ENST00000484378 TNFRSF10CO14798 259 aa28.43■■■□□ 2.14
HLA-C-207ENST00000484378 MFSD11O43934 449 aa28.43■■■□□ 2.14
HLA-C-207ENST00000484378 HEXIM1O94992 359 aaKnown RBP28.43■■■□□ 2.14
HLA-C-207ENST00000484378 CYP2A6P11509 494 aaPredicted RBP28.43■■■□□ 2.14
HLA-C-207ENST00000484378 TAF8Q7Z7C8 310 aa28.43■■■□□ 2.14
HLA-C-207ENST00000484378 LRRC49Q8IUZ0 686 aa28.43■■■□□ 2.14
HLA-C-207ENST00000484378 PELI3Q8N2H9 469 aa28.43■■■□□ 2.14
HLA-C-207ENST00000484378 FCRL3Q96P31 734 aaPredicted RBP28.43■■■□□ 2.14
HLA-C-207ENST00000484378 BBC3Q96PG8 261 aaPredicted RBP28.43■■■□□ 2.14
HLA-C-207ENST00000484378 LGR4Q9BXB1 951 aa28.43■■■□□ 2.14
HLA-C-207ENST00000484378 CTTNBP2NLQ9P2B4 639 aa28.43■■■□□ 2.14
HLA-C-207ENST00000484378 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP28.43■■■□□ 2.14
HLA-C-207ENST00000484378 PDE2AO00408 941 aaPredicted RBP28.42■■■□□ 2.14
HLA-C-207ENST00000484378 PTMSP20962 102 aa28.42■■■□□ 2.14
HLA-C-207ENST00000484378 IL4RP24394 825 aa28.42■■■□□ 2.14
HLA-C-207ENST00000484378 RBMS1P29558 406 aaKnown RBP28.42■■■□□ 2.14
HLA-C-207ENST00000484378 ZSCAN23Q3MJ62 389 aa28.42■■■□□ 2.14
HLA-C-207ENST00000484378 ARMC12Q5T9G4 340 aa28.42■■■□□ 2.14
HLA-C-207ENST00000484378 USP45Q70EL2 814 aa28.42■■■□□ 2.14
HLA-C-207ENST00000484378 FAM71BQ8TC56 605 aa28.42■■■□□ 2.14
HLA-C-207ENST00000484378 XPO4Q9C0E2 1151 aaKnown RBP28.42■■■□□ 2.14
HLA-C-207ENST00000484378 CYP4F12Q9HCS2 524 aa28.42■■■□□ 2.14
HLA-C-207ENST00000484378 KCTD5Q9NXV2 234 aa28.42■■■□□ 2.14
HLA-C-207ENST00000484378 RABGEF1Q9UJ41 708 aa28.42■■■□□ 2.14
HLA-C-207ENST00000484378 A0A1W2PNU3 283 aaPredicted RBP28.41■■■□□ 2.14
HLA-C-207ENST00000484378 NPIPB15A6NHN6 443 aaPredicted RBP28.41■■■□□ 2.14
HLA-C-207ENST00000484378 EIF4E1BA6NMX2 242 aaKnown RBP28.41■■■□□ 2.14
HLA-C-207ENST00000484378 PGLSO95336 258 aa28.41■■■□□ 2.14
HLA-C-207ENST00000484378 MYCLP1P12525 358 aaPredicted RBP28.41■■■□□ 2.14
HLA-C-207ENST00000484378 LHCGRP22888 699 aa28.41■■■□□ 2.14
HLA-C-207ENST00000484378 PDX1P52945 283 aa28.41■■■□□ 2.14
HLA-C-207ENST00000484378 DPYSL3Q14195 570 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms