RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 PIGOQ8TEQ8 1089 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 GCDHQ92947 438 aaPredicted RBP6.79□□□□□ -1.32
CLK1-212ENST00000482590 HDAC10Q969S8 669 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 GFM2Q969S9 779 aaKnown RBP6.79□□□□□ -1.32
CLK1-212ENST00000482590 IQCDQ96DY2 449 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 B3GALT6Q96L58 329 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 C16orf92Q96LL3 132 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 COG8Q96MW5 612 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 MYADMQ96S97 322 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 FOXB1Q99853 325 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 SLX1AQ9BQ83 275 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 TUFT1Q9NNX1 390 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 NECTIN3Q9NQS3 549 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 EIF2B3Q9NR50 452 aaKnown RBP6.79□□□□□ -1.32
CLK1-212ENST00000482590 ARHGEF3Q9NR81 526 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 MIOSQ9NXC5 875 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 WNT16Q9UBV4 365 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 FBXW11Q9UKB1 542 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 CLCA2Q9UQC9 943 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 COL4A3Q01955 1670 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 OBSL1O75147 1896 aa6.79□□□□□ -1.32
CLK1-212ENST00000482590 EP300Q09472 2414 aaPredicted RBP6.78□□□□□ -1.32
CLK1-212ENST00000482590 CACNA1AO00555 2505 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 SYNJ2BP-COX16A0A087WUM0 186 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 A0A1B0GUA9 196 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 UBE2QL1A1L167 161 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 ARHGEF35A5YM69 484 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 BTBD18B2RXH4 712 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 NDC80O14777 642 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 SPTLC2O15270 562 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 MTSS1O43312 755 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 AKR1B10O60218 316 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 N4BP1O75113 896 aaKnown RBP6.78□□□□□ -1.32
CLK1-212ENST00000482590 ENDOD1O94919 500 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 LARGE1O95461 756 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 LPLP06858 475 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 OR52Z1P0C646 297 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 CSH1P0DML2 217 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 CSH2P0DML3 217 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 JUPP14923 745 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 ACSL1P33121 698 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 NNMTP40261 264 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 IL1RL1Q01638 556 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 PRPF4BQ13523 1007 aaKnown RBP6.78□□□□□ -1.32
CLK1-212ENST00000482590 SEMA3AQ14563 771 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 PPA1Q15181 289 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 MAPK6Q16659 721 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 ME3Q16798 604 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 DCAF4L1Q3SXM0 396 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 PPM1LQ5SGD2 360 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 FBXO38Q6PIJ6 1188 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 PRSS55Q6UWB4 352 aaPredicted RBP6.78□□□□□ -1.32
CLK1-212ENST00000482590 ESPNLQ6ZVH7 1005 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 R3HCC1LQ7Z5L2 792 aaKnown RBP6.78□□□□□ -1.32
CLK1-212ENST00000482590 SLC44A2Q8IWA5 706 aaPredicted RBP6.78□□□□□ -1.32
CLK1-212ENST00000482590 GSPT2Q8IYD1 628 aaKnown RBP6.78□□□□□ -1.32
CLK1-212ENST00000482590 CCDC170Q8IYT3 715 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 NECAB1Q8N987 351 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 NSUN7Q8NE18 718 aaKnown RBP6.78□□□□□ -1.32
CLK1-212ENST00000482590 KCNG4Q8TDN1 519 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 KAT5Q92993 513 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 ZNF707Q96C28 371 aaPredicted RBP6.78□□□□□ -1.32
CLK1-212ENST00000482590 SDCCAG3Q96C92 435 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 SLC35A4Q96G79 324 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 TWNKQ96RR1 684 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 HSD17B14Q9BPX1 270 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 HGH1Q9BTY7 390 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 DDX23Q9BUQ8 820 aaKnown RBP6.78□□□□□ -1.32
CLK1-212ENST00000482590 GPR87Q9BY21 358 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 ACE2Q9BYF1 805 aaPredicted RBP6.78□□□□□ -1.32
CLK1-212ENST00000482590 NT5C3AQ9H0P0 336 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 PDZD7Q9H5P4 517 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 TBC1D17Q9HA65 648 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 RXFP3Q9NSD7 469 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 TBX20Q9UMR3 447 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 PCSK5Q92824 1860 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 SPAG17Q6Q759 2223 aa6.78□□□□□ -1.32
CLK1-212ENST00000482590 OTOGLQ3ZCN5 2332 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 CLCA1A8K7I4 914 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 AGAP14A8MT82 685 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 PI15O43692 258 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 JAK2O60674 1132 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 FAM20BO75063 409 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 MED24O75448 989 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 BEST1O76090 585 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 RECQL4O94761 1208 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 GUCA1CO95843 209 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 XRCC6P12956 609 aaKnown RBP eCLIP6.77□□□□□ -1.33
CLK1-212ENST00000482590 LAMP2P13473 410 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 FDPSP14324 419 aaKnown RBP6.77□□□□□ -1.33
CLK1-212ENST00000482590 BMP5P22003 454 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 HADHAP40939 763 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 NAMPTP43490 491 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 MC1RQ01726 317 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 LRRC74AQ0VAA2 488 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 ORC2Q13416 577 aaPredicted RBP6.77□□□□□ -1.33
CLK1-212ENST00000482590 CUL4BQ13620 913 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 IL10RAQ13651 578 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 FAM187BQ17R55 369 aa6.77□□□□□ -1.33
CLK1-212ENST00000482590 FAM171A1Q5VUB5 890 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms