RNA–Protein interactions for RNA: ENST00000482499.1

CMC1-210, Transcript of C-X9-C motif containing 1, human

TSL 2

Gene CMC1, Length 446 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC1-210	ENST00000482499	INTS6	Q9UL03	887 aa	Known RBP	4.16	□□□□□ -1.74
CMC1-210	ENST00000482499	CARD8	Q9Y2G2	431 aa		4.16	□□□□□ -1.74
CMC1-210	ENST00000482499	ADGRF5	Q8IZF2	1346 aa		4.16	□□□□□ -1.74
CMC1-210	ENST00000482499		A0A1B0GUV1	79 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	CLEC18A	A5D8T8	446 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	INAFM1	C9JVW0	142 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	EBAG9	O00559	213 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	AHCYL1	O43865	530 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	TSPAN9	O75954	239 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	EIF2S1	P05198	315 aa	Known RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	PCNA	P12004	261 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	CDH2	P19022	906 aa	Predicted RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	TM4SF1	P30408	202 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	RFC1	P35251	1148 aa	Predicted RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	CENPA	P49450	140 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	HDAC4	P56524	1084 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	NUCB1	Q02818	461 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	CREB5	Q02930	508 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	CRYZ	Q08257	329 aa	Known RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	CHAF1B	Q13112	559 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	FRG1	Q14331	258 aa	Known RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	OTUD3	Q5T2D3	398 aa	Predicted RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	SERPINA11	Q86U17	422 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	TDRP	Q86YL5	185 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	WDTC1	Q8N5D0	677 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	CLEC18C	Q8NCF0	446 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	NEK9	Q8TD19	979 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	POMGNT1	Q8WZA1	660 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	ARHGEF2	Q92974	986 aa	Known RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	NSUN4	Q96CB9	384 aa	Known RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	FAM120B	Q96EK7	910 aa	Known RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	ZC3HAV1L	Q96H79	300 aa	Known RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	SIN3A	Q96ST3	1273 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	STRA6	Q9BX79	667 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	TM6SF1	Q9BZW5	370 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	SH2D4A	Q9H788	454 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	KAT14	Q9H8E8	782 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	MAP6D1	Q9H9H5	199 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	SPAG4	Q9NPE6	437 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	CLIC5	Q9NZA1	410 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	SEL1L	Q9UBV2	794 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	ZNF215	Q9UL58	517 aa	Predicted RBP	4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	FAM96B	Q9Y3D0	163 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499	PTGDR2	Q9Y5Y4	395 aa		4.15	□□□□□ -1.75
CMC1-210	ENST00000482499		A0A1B0GVT2	93 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	BECN2	A8MW95	431 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	MYO1G	B0I1T2	1018 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499		B4DLN1	442 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	USP17L23	D6RBM5	183 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	MDM4	O15151	490 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	VILL	O15195	856 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	BCAT2	O15382	392 aa	Predicted RBP	4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	LIAS	O43766	372 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	PAGE4	O60829	102 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	LDB3	O75112	727 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	ATP2C2	O75185	946 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	TF	P02787	698 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	MMP3	P08254	477 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	CTPS1	P17812	591 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	KRTAP5-9	P26371	169 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	ACTN2	P35609	894 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	HADHA	P40939	763 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	ART1	P52961	327 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	TMPRSS3	P57727	454 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	CLDN2	P57739	230 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	SNX16	P57768	344 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	NLRP5	P59047	1200 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	ERVFC1-1	P60608	527 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	ROR2	Q01974	943 aa	Known RBP	4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	CEBPZ	Q03701	1054 aa	Known RBP	4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	CRYM	Q14894	314 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	FAM76B	Q5HYJ3	339 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	CFAP58	Q5T655	872 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	NCAPH2	Q6IBW4	605 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	LRRC8E	Q6NSJ5	796 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	CES5A	Q6NT32	575 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	CPLX2	Q6PUV4	134 aa	Known RBP	4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	TSSK4	Q6SA08	328 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	ENOSF1	Q7L5Y1	443 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	SZRD1	Q7Z422	152 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	DHX40	Q8IX18	779 aa	Known RBP	4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	ZDHHC23	Q8IYP9	409 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	CADM3	Q8N126	398 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	SRBD1	Q8N5C6	995 aa	Known RBP	4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	HORMAD2	Q8N7B1	307 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	RNF183	Q96D59	192 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	MAP7D2	Q96T17	732 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	MAK16	Q9BXY0	300 aa	Known RBP	4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	TASP1	Q9H6P5	420 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	PLAC1	Q9HBJ0	212 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	SLC6A13	Q9NSD5	602 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	RRP7BP	Q9NSQ0	103 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	POLG2	Q9UHN1	485 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	NRBP1	Q9UHY1	535 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	HAO1	Q9UJM8	370 aa		4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	AAR2	Q9Y312	384 aa	Known RBP	4.14	□□□□□ -1.75
CMC1-210	ENST00000482499	TTLL3	Q9Y4R7	772 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms