RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 TRIM23P36406 574 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 CDH6P55285 790 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 KIAA1024LP59773 190 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 ZBED6P86452 979 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 SLC25A11Q02978 314 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 KRT81Q14533 505 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 HADHQ16836 314 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 RALGPS1Q5JS13 557 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 MARC1Q5VT66 337 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 PNCKQ6P2M8 343 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 GPR155Q7Z3F1 870 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 LRRC49Q8IUZ0 686 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 SPACA3Q8IXA5 215 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 PELI3Q8N2H9 469 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 PGBD5Q8N414 524 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 NIPA2Q8N8Q9 360 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 WDR36Q8NI36 951 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 PCDH19Q8TAB3 1148 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 PDCD6IPQ8WUM4 868 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 SPOCK2Q92563 424 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 ATXN7L3BQ96GX2 97 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 FCRL3Q96P31 734 aaPredicted RBP13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 CSPG4P5Q96PW8 444 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 NUDCD1Q96RS6 583 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 RBM15Q96T37 977 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 NUP85Q9BW27 656 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 SYNDIG1Q9H7V2 258 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 SIRPGQ9P1W8 387 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 ANAPC7Q9UJX3 599 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 CAPN11Q9UMQ6 739 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 PHTF1Q9UMS5 762 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 LUC7L2Q9Y383 392 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 PCDHGC4Q9Y5F7 938 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 SHROOM3Q8TF72 1996 aa13.49□□□□□ -0.25
CTDSP1-208ENST00000482272 SMG1Q96Q15 3661 aaKnown RBP13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 HTRA2O43464 458 aaPredicted RBP13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 MAFKO60675 156 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 SOCS5O75159 536 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 CR2P20023 1033 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 SSR1P43307 286 aaKnown RBP13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 TLE3Q04726 772 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 PTPRRQ15256 657 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 TSR1Q2NL82 804 aaKnown RBP13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 CCDC122Q5T0U0 273 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 IGF2-ASQ6U949 168 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 TAF8Q7Z7C8 310 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 NDUFAF2Q8N183 169 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 ARL14Q8N4G2 192 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 ATPAF2Q8N5M1 289 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 KCNE4Q8WWG9 221 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 CCDC97Q96F63 343 aaPredicted RBP13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 NAF1Q96HR8 494 aaKnown RBP13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 HIC2Q96JB3 615 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 SLC46A1Q96NT5 459 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 DPH1Q9BZG8 443 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 PCDH18Q9HCL0 1135 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 B4GALT6Q9UBX8 382 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 MOSPD1Q9UJG1 213 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 PCDHGA8Q9Y5G5 932 aa13.48□□□□□ -0.25
CTDSP1-208ENST00000482272 ACACAQ13085 2346 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 TEX51A0A1B0GUA7 166 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 A0A1W2PNU3 283 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 TMEM202A6NGA9 273 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 NTN3O00634 580 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 CPP00450 1065 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 CYP1A2P05177 515 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 CD48P09326 243 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 KRT10P13645 584 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 VIPR1P32241 457 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 MMP13P45452 471 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 UCNP55089 124 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 CXADRP78310 365 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 ARHGEF7Q14155 803 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 TCEA2Q15560 299 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 DENND2CQ68D51 928 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 ALKBH5Q6P6C2 394 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 FOXR1Q6PIV2 292 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 OGFOD3Q6PK18 319 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 FAM46DQ8NEK8 389 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 CCDC74AQ96AQ1 378 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 NUS1Q96E22 293 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 COQ10AQ96MF6 247 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 BBC3Q96PG8 261 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 GFM1Q96RP9 751 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 MGME1Q9BQP7 344 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 WDR26Q9H7D7 661 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 NOD2Q9HC29 1040 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 ASCL3Q9NQ33 180 aa13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 MRPL40Q9NQ50 206 aaKnown RBP13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 PHPT1Q9NRX4 125 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 RCOR3Q9P2K3 495 aaPredicted RBP13.47□□□□□ -0.25
CTDSP1-208ENST00000482272 CCDC187A0A096LP49 1063 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 PMS2P1A4D2B8 440 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 TK2O00142 265 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 PSMD11O00231 422 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 IL4RP24394 825 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 MLLT3P42568 568 aaPredicted RBP13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 MAXP61244 160 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 ITKQ08881 620 aa13.46□□□□□ -0.25
CTDSP1-208ENST00000482272 MMRN1Q13201 1228 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms