RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 YY2O15391 372 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 AKR1B10O60218 316 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 SOCS5O75159 536 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 USP12O75317 370 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 RASGRP1O95267 797 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 GP1BAP07359 652 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 ALPIP09923 528 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 H2AFZP0C0S5 128 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 HOXB3P14651 431 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-212ENST00000482251 LHCGRP22888 699 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 ITPKBP27987 946 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 HNRNPH3P31942 346 aaKnown RBP10.5□□□□□ -0.73
CPSF4-212ENST00000482251 VIPR1P32241 457 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 HSPA9P38646 679 aaKnown RBP10.5□□□□□ -0.73
CPSF4-212ENST00000482251 ETV3P41162 512 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 GARSP41250 739 aaKnown RBP10.5□□□□□ -0.73
CPSF4-212ENST00000482251 ARSEP51690 589 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 POLR2LP62875 67 aaKnown RBP10.5□□□□□ -0.73
CPSF4-212ENST00000482251 GABREP78334 506 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 DSC2Q02487 901 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 GBE1Q04446 702 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 GALNT2Q10471 571 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 MESDQ14696 234 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 SKOR2Q2VWA4 1001 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-212ENST00000482251 ANKRD20A8PQ5CZ79 823 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 CDCP2Q5VXM1 449 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 H2AFVQ71UI9 128 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 HSD11B1LQ7Z5J1 315 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 VSTM4Q8IW00 320 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 SFTPA2Q8IWL1 248 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 OR8K1Q8NGG5 319 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 OR1E3Q8WZA6 343 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 NAF1Q96HR8 494 aaKnown RBP10.5□□□□□ -0.73
CPSF4-212ENST00000482251 DEPDC7Q96QD5 511 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 CHP1Q99653 195 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 SEMA3CQ99985 751 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 ZNF670Q9BS34 389 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 BOCQ9BWV1 1114 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 LGR4Q9BXB1 951 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 NRSN2Q9GZP1 204 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 WDR26Q9H7D7 661 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 USP29Q9HBJ7 922 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 ZNHIT6Q9NWK9 470 aaKnown RBP10.5□□□□□ -0.73
CPSF4-212ENST00000482251 RCOR3Q9P2K3 495 aaPredicted RBP10.5□□□□□ -0.73
CPSF4-212ENST00000482251 UVRAGQ9P2Y5 699 aa10.5□□□□□ -0.73
CPSF4-212ENST00000482251 LRRD1A4D1F6 860 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 PMS2P1A4D2B8 440 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 EME2A4GXA9 379 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-212ENST00000482251 B4DGG1 531 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 AGRPO00253 132 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 TOR1BO14657 336 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 TPP1O14773 563 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 HTRA2O43464 458 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-212ENST00000482251 HEXIM1O94992 359 aaKnown RBP10.49□□□□□ -0.73
CPSF4-212ENST00000482251 PGLSO95336 258 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 HLA-DQB2P05538 268 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 PDHA1P08559 390 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 TPM1P09493 284 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 TMEM253P0C7T8 217 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 TNNT1P13805 278 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 ABCG1P45844 678 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 PEX5P50542 639 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 BLKP51451 505 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 KIAA1024LP59773 190 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 RTP5Q14D33 572 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 PAFAH1B3Q15102 231 aaKnown RBP10.49□□□□□ -0.73
CPSF4-212ENST00000482251 AGERQ15109 404 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 ELOCQ15369 112 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 ASTE1Q2TB18 679 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-212ENST00000482251 C3orf38Q5JPI3 329 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 ARMC12Q5T9G4 340 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 ESRP1Q6NXG1 681 aaKnown RBP10.49□□□□□ -0.73
CPSF4-212ENST00000482251 FOXR1Q6PIV2 292 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 RFLNAQ6ZTI6 216 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 PDZD3Q86UT5 571 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 FSTL5Q8N475 847 aaPredicted RBP10.49□□□□□ -0.73
CPSF4-212ENST00000482251 PQLC3Q8N755 202 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 ARL10Q8N8L6 244 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 OR56A4Q8NGH8 313 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 FAM71BQ8TC56 605 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 RAPGEF5Q92565 580 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 CCDC74AQ96AQ1 378 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 COQ10AQ96MF6 247 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 CCDC3Q9BQI4 270 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 CYP4F12Q9HCS2 524 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 CD84Q9UIB8 345 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 RABGEF1Q9UJ41 708 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 SALL4Q9UJQ4 1053 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 PADI4Q9UM07 663 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 GPR34Q9UPC5 381 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 HYOU1Q9Y4L1 999 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 RAI2Q9Y5P3 530 aa10.49□□□□□ -0.73
CPSF4-212ENST00000482251 RP1P56715 2156 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 KNTC1P50748 2209 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 ASXL3Q9C0F0 2248 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 SSU72P8A0A1W2PR75 194 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 CFAP69A5D8W1 941 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 TNFP01375 233 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 KRT1P04264 644 aa10.48□□□□□ -0.73
CPSF4-212ENST00000482251 KRT7P08729 469 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms