RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	EFHC2	Q5JST6	749 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	TMEM164	Q5U3C3	297 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	LRRC31	Q6UY01	552 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	BNIPL	Q7Z465	357 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	SLFN11	Q7Z7L1	901 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	ATCAY	Q86WG3	371 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	CIR1	Q86X95	450 aa	Predicted RBP	15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	ACRBP	Q8NEB7	543 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	GPBAR1	Q8TDU6	330 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	SCG3	Q8WXD2	468 aa	Known RBP	15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	USP7	Q93009	1102 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	CCDC74A	Q96AQ1	378 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	ARHGEF26	Q96DR7	871 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	TRIM44	Q96DX7	344 aa	Predicted RBP	15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	C1QTNF2	Q9BXJ5	285 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	CPEB1	Q9BZB8	566 aa	Known RBP	15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	ARHGEF38	Q9NXL2	777 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	COX16	Q9P0S2	106 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	VPS28	Q9UK41	221 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	FADS3	Q9Y5Q0	445 aa		15.72	■□□□□ 0.11
HDLBP-238	ENST00000479894	STMND1	H3BQB6	276 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	KRT7	P08729	469 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	ADRB3	P13945	408 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	TSHR	P16473	764 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	ADRA1B	P35368	520 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	ETV5	P41161	510 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	ATP1A2	P50993	1020 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	THOP1	P52888	689 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	YPEL5	P62699	121 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	ODF2	Q5BJF6	829 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	HIST2H2BC	Q6DN03	193 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	SCYL2	Q6P3W7	929 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	FSTL5	Q8N475	847 aa	Predicted RBP	15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	ATP11C	Q8NB49	1132 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	OR52K2	Q8NGK3	314 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	C9orf43	Q8TAL5	461 aa	Predicted RBP	15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	DESI2	Q9BSY9	194 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	CLPB	Q9H078	707 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	TKTL2	Q9H0I9	626 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	TCEAL2	Q9H3H9	227 aa	Predicted RBP	15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	TMPRSS4	Q9NRS4	437 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	PIGV	Q9NUD9	493 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	IL36A	Q9UHA7	158 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	PLAA	Q9Y263	795 aa		15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	15.71	■□□□□ 0.11
HDLBP-238	ENST00000479894	DOCK4	Q8N1I0	1966 aa		15.71	■□□□□ 0.1
HDLBP-238	ENST00000479894	ESPL1	Q14674	2120 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	ITGB7	P26010	798 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	SSR1	P43307	286 aa	Known RBP	15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	RECQL	P46063	649 aa	Predicted RBP	15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	BLK	P51451	505 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	MESD	Q14696	234 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	ELOC	Q15369	112 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	C15orf59	Q2T9L4	293 aa	Predicted RBP	15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	ARSI	Q5FYB1	569 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	LRRC38	Q5VT99	294 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	C11orf63	Q6NUN7	778 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	FBXL22	Q6P050	247 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	DNAAF5	Q86Y56	855 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	MAP7D3	Q8IWC1	876 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	KIAA1524	Q8TCG1	905 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	TEKT4	Q8WW24	435 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	ALS2CR12	Q96Q35	445 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	C2orf49	Q9BVC5	232 aa	Predicted RBP	15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	CDH19	Q9H159	772 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	GULP1	Q9UBP9	304 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	APPL1	Q9UKG1	709 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	DOLK	Q9UPQ8	538 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	TBC1D30	Q9Y2I9	924 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	PPP2R2C	Q9Y2T4	447 aa		15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	REXO2	Q9Y3B8	237 aa	Known RBP	15.7	■□□□□ 0.1
HDLBP-238	ENST00000479894	LRBA	P50851	2863 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	RNF103	O00237	685 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	TSPAN6	O43657	245 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	SPOP	O43791	374 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	LEFTY1	O75610	366 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	MT-CO1	P00395	513 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	ALPI	P09923	528 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	PNLIP	P16233	465 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	L1CAM	P32004	1257 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	MAPK10	P53779	464 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	HDAC4	P56524	1084 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	NRG1	Q02297	640 aa	Predicted RBP	15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	ERMARD	Q5T6L9	678 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	FAXC	Q5TGI0	409 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	TRNP1	Q6NT89	227 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	MACC1	Q6ZN28	852 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	POLN	Q7Z5Q5	900 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	DAAM2	Q86T65	1068 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	FAM131B	Q86XD5	332 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	KY	Q8NBH2	561 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	CHST14	Q8NCH0	376 aa		15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	PNMA8B	Q9ULN7	279 aa	Predicted RBP	15.69	■□□□□ 0.1
HDLBP-238	ENST00000479894	SPEN	Q96T58	3664 aa	Known RBP	15.68	■□□□□ 0.1
HDLBP-238	ENST00000479894	LRCH4	O75427	683 aa		15.68	■□□□□ 0.1
HDLBP-238	ENST00000479894	PAGE1	O75459	146 aa		15.68	■□□□□ 0.1
HDLBP-238	ENST00000479894	CLDN11	O75508	207 aa		15.68	■□□□□ 0.1
HDLBP-238	ENST00000479894	MIP	P30301	263 aa		15.68	■□□□□ 0.1
HDLBP-238	ENST00000479894	RIPPLY3	P57055	190 aa		15.68	■□□□□ 0.1
HDLBP-238	ENST00000479894	PITX1	P78337	314 aa	Predicted RBP	15.68	■□□□□ 0.1

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