RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 SCUBE1Q8IWY4 988 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 MFSD4AQ8N468 514 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 LZTR1Q8N653 840 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 ARFGAP1Q8N6T3 406 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 RTL3Q8N8U3 475 aaKnown RBP6.3□□□□□ -1.4
SF3B1-209ENST00000479532 TERB1Q8NA31 727 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 FIBINQ8TAL6 211 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 SNRNP27Q8WVK2 155 aaKnown RBP6.3□□□□□ -1.4
SF3B1-209ENST00000479532 RUBCNQ92622 972 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 IGSF8Q969P0 613 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 ZBTB9Q96C00 473 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 DTNBP1Q96EV8 351 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 MISP3Q96FF7 219 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 PRICKLE1Q96MT3 831 aaPredicted RBP6.3□□□□□ -1.4
SF3B1-209ENST00000479532 PEBP4Q96S96 227 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 ZNF670Q9BS34 389 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 OSBPL6Q9BZF3 934 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 RAB6CQ9H0N0 254 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 TBC1D17Q9HA65 648 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 CD320Q9NPF0 282 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 MBNL3Q9NUK0 354 aaKnown RBP6.3□□□□□ -1.4
SF3B1-209ENST00000479532 HAUS2Q9NVX0 235 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 TMEM248Q9NWD8 314 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 GPATCH2LQ9NWQ4 482 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 CHCHD3Q9NX63 227 aaKnown RBP6.3□□□□□ -1.4
SF3B1-209ENST00000479532 TRMT1Q9NXH9 659 aaKnown RBP6.3□□□□□ -1.4
SF3B1-209ENST00000479532 TRIM10Q9UDY6 481 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 SLC25A13Q9UJS0 675 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 HPCAL4Q9UM19 191 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 NDRG2Q9UN36 371 aaKnown RBP6.3□□□□□ -1.4
SF3B1-209ENST00000479532 SLC8A2Q9UPR5 921 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 PLAAQ9Y263 795 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 SLC27A6Q9Y2P4 619 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 SF3B6Q9Y3B4 125 aaKnown RBP6.3□□□□□ -1.4
SF3B1-209ENST00000479532 CAPN6Q9Y6Q1 641 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 DUSP10Q9Y6W6 482 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 MYOFQ9NZM1 2061 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 COL4A3Q01955 1670 aa6.3□□□□□ -1.4
SF3B1-209ENST00000479532 DOCK4Q8N1I0 1966 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 ILVBLA1L0T0 632 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 TMEM221A6NGB7 291 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 OTOL1A6NHN0 477 aaPredicted RBP6.29□□□□□ -1.4
SF3B1-209ENST00000479532 ARHGAP42A6NI28 874 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 WASH4PA8MWX3 477 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 H0Y8X5 98 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 M0R296 226 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 EBAG9O00559 213 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 RAMP2O60895 175 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 ATG13O75143 517 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 KAT7O95251 611 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 FTCDO95954 541 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 GOT1P17174 413 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 KDELR1P24390 212 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 IL1R2P27930 398 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 HOXC13P31276 330 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 OPRD1P41143 372 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 SLC6A11P48066 632 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 SGSHP51688 502 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 RPS6KA3P51812 740 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 GEMIN4P57678 1058 aaKnown RBP6.29□□□□□ -1.4
SF3B1-209ENST00000479532 YBEYP58557 167 aaPredicted RBP6.29□□□□□ -1.4
SF3B1-209ENST00000479532 SUMO1P63165 101 aaKnown RBP6.29□□□□□ -1.4
SF3B1-209ENST00000479532 SEMA3BQ13214 749 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 TFDP2Q14188 446 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 POLD3Q15054 466 aaPredicted RBP6.29□□□□□ -1.4
SF3B1-209ENST00000479532 RPS6KA1Q15418 735 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 SF1Q15637 639 aaKnown RBP6.29□□□□□ -1.4
SF3B1-209ENST00000479532 PARP15Q460N3 678 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 HSF5Q4G112 596 aaPredicted RBP6.29□□□□□ -1.4
SF3B1-209ENST00000479532 TMEM196Q5HYL7 178 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 CCDC181Q5TID7 509 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 MANEALQ5VSG8 457 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 IL31Q6EBC2 164 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 MICALCLQ6ZW33 695 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 BZW1Q7L1Q6 419 aaKnown RBP6.29□□□□□ -1.4
SF3B1-209ENST00000479532 C14orf80Q86SX3 495 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 NT5DC3Q86UY8 548 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 CIR1Q86X95 450 aaPredicted RBP6.29□□□□□ -1.4
SF3B1-209ENST00000479532 RFX6Q8HWS3 928 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 KATNAL2Q8IYT4 538 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 ZNF683Q8IZ20 524 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 RCOR2Q8IZ40 523 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 PYROXD2Q8N2H3 581 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.29□□□□□ -1.4
SF3B1-209ENST00000479532 LRRC57Q8N9N7 239 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 EXD1Q8NHP7 514 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 PIWIL2Q8TC59 973 aaKnown RBP6.29□□□□□ -1.4
SF3B1-209ENST00000479532 NSMCE1Q8WV22 266 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 P3H4Q92791 437 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 CSPG4P5Q96PW8 444 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 OSBPL9Q96SU4 736 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 FERMT1Q9BQL6 677 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 CIPCQ9C0C6 399 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 MAGEH1Q9H213 219 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 PCDH18Q9HCL0 1135 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 LTB4R2Q9NPC1 389 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 ANLNQ9NQW6 1124 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 ABCB8Q9NUT2 735 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 KLHL11Q9NVR0 708 aa6.29□□□□□ -1.4
SF3B1-209ENST00000479532 MPP6Q9NZW5 540 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms