RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 RANBP3LQ86VV4 465 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 MUC15Q8N387 334 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ARL10Q8N8L6 244 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 OR56A4Q8NGH8 313 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 CCDC106Q9BWC9 280 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PLEKHA3Q9HB20 300 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 NMRAL1Q9HBL8 299 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 NGBQ9NPG2 151 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 TIAM1Q13009 1591 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 EYA2O00167 538 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 FBP2O00757 339 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 IRF6O14896 467 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 POLR1CO15160 346 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 RTN2O75298 545 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 CYP7B1O75881 506 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ACTL6BO94805 426 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 SLC25A27O95847 323 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PCCAP05165 728 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 OR3A3P47888 321 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 OR3A2P47893 321 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ZNF45Q02386 682 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MTM1Q13496 603 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MTMR1Q13613 665 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 GNMTQ14749 295 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 RETSATQ6NUM9 610 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 FAM196AQ6ZSG2 479 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 SSX6Q7RTT6 188 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 CARFQ8N187 725 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ABHD5Q8WTS1 349 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 KLHL6Q8WZ60 621 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 RBM18Q96H35 190 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 RNF145Q96MT1 663 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 TRIB1Q96RU8 372 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 OMDQ99983 421 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 NUDT12Q9BQG2 462 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 SNRNP25Q9BV90 132 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 ZNF350Q9GZX5 532 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ETNK1Q9HBU6 452 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MORF4L1Q9UBU8 362 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ST14Q9Y5Y6 855 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 LAMC1P11047 1609 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 FRMPD4Q14CM0 1322 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 FAM230AA0A1W2PPH8 454 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 A0A1W2PQ27 194 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 A0A1W2PQ64 194 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 A0A1W2PQD8 194 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 OR6C6A6NF89 314 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 H7BYZ3 331 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PCDH8O95206 1070 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 LCP1P13796 627 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 LHCGRP22888 699 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MMP13P45452 471 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 LHX1P48742 406 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 C2orf80Q0P641 193 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 FSTL1Q12841 308 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 FAM162BQ5T6X4 162 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 EFCAB12Q6NXP0 572 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 NXPE4Q6UWF7 544 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ZDHHC17Q8IUH5 632 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 GSPT2Q8IYD1 628 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 ZNF786Q8N393 782 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 FAM109AQ8N4B1 249 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 SHDQ96IW2 340 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 YME1L1Q96TA2 773 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MKNK1Q9BUB5 465 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 CCDC32Q9BV29 185 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 DHX35Q9H5Z1 703 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 DUSP22Q9NRW4 184 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 KLHL13Q9P2N7 655 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 B4GALT7Q9UBV7 327 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MYRFQ9Y2G1 1151 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ACTL7AQ9Y615 435 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 BAZ2BQ9UIF8 2168 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 CACNB4O00305 520 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 PPEF1O14829 653 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 KCNN4O15554 427 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PHGDHO43175 533 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 ENO3P13929 434 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 LIFRP42702 1097 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 GLP1RP43220 463 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 SOX9P48436 509 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PRIM1P49642 420 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 GMPSP49915 693 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 FASTKQ14296 549 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 RNF44Q7L0R7 432 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PSTKQ8IV42 348 aaKnown RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 REM2Q8IYK8 340 aaPredicted RBP5.44□□□□□ -1.54
USF3-202ENST00000478658 HELQQ8TDG4 1101 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MEIS3Q99687 375 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 TRIM9Q9C026 710 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 CDT1Q9H211 546 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MOB1AQ9H8S9 216 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 SEC14L4Q9UDX3 406 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PADI2Q9Y2J8 665 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 MYPNQ86TC9 1320 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 A0A087WUU8 490 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 RBAK-RBAKDNI3L0D1 243 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PDHXO00330 501 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 ZNF682O95780 498 aa5.44□□□□□ -1.54
USF3-202ENST00000478658 PAX7P23759 505 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms