RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 MRFAP1L1Q96HT8 127 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 LMLNQ96KR4 655 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 HNRNPABQ99729 332 aaKnown RBP4.77□□□□□ -1.65
CKS1B-207ENST00000477676 C7orf25Q9BPX7 421 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 NUP58Q9BVL2 599 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 BTBD2Q9BX70 525 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 OR10A2Q9H208 303 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 BLZF1Q9H2G9 400 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 TNMDQ9H2S6 317 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 TMEM245Q9H330 911 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 KIAA1586Q9HCI6 787 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 TLR8Q9NR97 1041 aaKnown RBP4.77□□□□□ -1.65
CKS1B-207ENST00000477676 SERGEFQ9UGK8 458 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 AGO1Q9UL18 857 aaKnown RBP4.77□□□□□ -1.65
CKS1B-207ENST00000477676 MTMR6Q9Y217 621 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 ANKRD6Q9Y2G4 727 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.77□□□□□ -1.65
CKS1B-207ENST00000477676 ITPR2Q14571 2701 aa4.77□□□□□ -1.65
CKS1B-207ENST00000477676 SPTBN1Q01082 2364 aaKnown RBP4.77□□□□□ -1.65
CKS1B-207ENST00000477676 FLRT2O43155 660 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 PAPSS1O43252 624 aaPredicted RBP4.76□□□□□ -1.65
CKS1B-207ENST00000477676 TNFSF14O43557 240 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 PCDHGA12O60330 932 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 CER1O95813 267 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 HLA-DRAP01903 254 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 FAM200BP0CF97 657 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 PLA2G2AP14555 144 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 OXTRP30559 389 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 EIF2S3P41091 472 aaKnown RBP4.76□□□□□ -1.65
CKS1B-207ENST00000477676 SUMO1P63165 101 aaKnown RBP4.76□□□□□ -1.65
CKS1B-207ENST00000477676 GUCY1A3Q02108 690 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 PPP3CAQ08209 521 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 INCA1Q0VD86 236 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 STK4Q13043 487 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 DNAJC3Q13217 504 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 TRPC3Q13507 836 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 PREPLQ4J6C6 727 aaPredicted RBP4.76□□□□□ -1.65
CKS1B-207ENST00000477676 UNC13DQ70J99 1090 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 KANSL1Q7Z3B3 1105 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 CCDC186Q7Z3E2 898 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 ANKS1BQ7Z6G8 1248 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 GATAD2AQ86YP4 633 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 DENND1CQ8IV53 801 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 LINC00301Q8NCQ3 95 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 OR2T3Q8NH03 318 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 SNX19Q92543 992 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 PRCCQ92733 491 aaPredicted RBP4.76□□□□□ -1.65
CKS1B-207ENST00000477676 DHX58Q96C10 678 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 CYFIP2Q96F07 1278 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 TNIP3Q96KP6 325 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 SEMA4CQ9C0C4 833 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 NACA2Q9H009 215 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 KCTD10Q9H3F6 313 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 FBXO44Q9H4M3 255 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 PRSS16Q9NQE7 514 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 PLA2G3Q9NZ20 509 aa4.76□□□□□ -1.65
CKS1B-207ENST00000477676 LSM7Q9UK45 103 aaKnown RBP4.76□□□□□ -1.65
CKS1B-207ENST00000477676 INTS6Q9UL03 887 aaKnown RBP4.76□□□□□ -1.65
CKS1B-207ENST00000477676 REXO2Q9Y3B8 237 aaKnown RBP4.76□□□□□ -1.65
CKS1B-207ENST00000477676 ATP8B3O60423 1300 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 UBE4BO95155 1302 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 A0A0G2JNJ9 132 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 A0A1B0GTQ1 180 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 A0A1W2PR77 199 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 PMS2P1A4D2B8 440 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 PYCARD-AS1I3L0S3 204 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 POLR2DO15514 142 aaKnown RBP4.75□□□□□ -1.65
CKS1B-207ENST00000477676 EXOC3O60645 756 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 SEMA4FO95754 770 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 TRIM49P0CI25 452 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 TRIM49CP0CI26 452 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 KRT15P19012 456 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 CD70P32970 193 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 GRK6P43250 576 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 ABCG1P45844 678 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 ACADVLP49748 655 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 ZNF132P52740 706 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 METAP1P53582 386 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 SESN2P58004 480 aaPredicted RBP4.75□□□□□ -1.65
CKS1B-207ENST00000477676 SNRPFP62306 86 aaKnown RBP4.75□□□□□ -1.65
CKS1B-207ENST00000477676 GABREP78334 506 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 SEMG2Q02383 582 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 TARDBPQ13148 414 aaKnown RBP eCLIP4.75□□□□□ -1.65
CKS1B-207ENST00000477676 BIRC3Q13489 604 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 GRM7Q14831 915 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 STARD3Q14849 445 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 EIF4HQ15056 248 aaKnown RBP4.75□□□□□ -1.65
CKS1B-207ENST00000477676 KNOP1Q1ED39 458 aaKnown RBP4.75□□□□□ -1.65
CKS1B-207ENST00000477676 RAB41Q5JT25 222 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 IL27RAQ6UWB1 636 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 UNC93AQ86WB7 457 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 ZC3H7AQ8IWR0 971 aaKnown RBP4.75□□□□□ -1.65
CKS1B-207ENST00000477676 GALNT15Q8N3T1 639 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 CPXM2Q8N436 756 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 D2HGDHQ8N465 521 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.75□□□□□ -1.65
CKS1B-207ENST00000477676 SLC4A11Q8NBS3 891 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 TAS1R2Q8TE23 839 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 SAP25Q8TEE9 199 aa4.75□□□□□ -1.65
CKS1B-207ENST00000477676 ZNF483Q8TF39 744 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms