RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 TARDBPQ13148 414 aaKnown RBP eCLIP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 SELENBP1Q13228 472 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 TNFAIP1Q13829 316 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 EFTUD2Q15029 972 aaKnown RBP eCLIP4.75□□□□□ -1.651e-9■■□□□ 11.5
PTCD3-212ENST00000477520 SF3B4Q15427 424 aaKnown RBP eCLIP4.75□□□□□ -1.654e-16■■□□□ 13.2
PTCD3-212ENST00000477520 SIX1Q15475 284 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 MAPRE1Q15691 268 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 NPTX1Q15818 432 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 PKN2Q16513 984 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 CYP2A13Q16696 494 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 LRRC36Q1X8D7 754 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ZNF181Q2M3W8 571 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ANKRD39Q53RE8 183 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 FAM47CQ5HY64 1035 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ZBTB41Q5SVQ8 909 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 HYIQ5T013 277 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 IFIT1BQ5T764 474 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 INTS11Q5TA45 600 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ARHGEF16Q5VV41 709 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 IZUMO3Q5VZ72 239 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 KRT79Q5XKE5 535 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 IQSEC1Q6DN90 963 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ZNF544Q6NX49 715 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 KIAA0408Q6ZU52 694 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 CYP4V2Q6ZWL3 525 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 USP50Q70EL3 339 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 FKBP9P1Q75LS8 142 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 DGLUCYQ7Z3D6 616 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 TFAP2DQ7Z6R9 452 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 FAM124AQ86V42 546 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 IGFN1Q86VF2 1251 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ARMC8Q8IUR7 673 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ELMOD2Q8IZ81 293 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 CERS5Q8N5B7 392 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 KYQ8NBH2 561 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 GSTCDQ8NEC7 633 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 DNERQ8NFT8 737 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ETNPPLQ8TBG4 499 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 TCP10LQ8TDR4 215 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 PYDC1Q8WXC3 89 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 E2F7Q96AV8 911 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 VPS33AQ96AX1 596 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 NSUN4Q96CB9 384 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ARHGEF26Q96DR7 871 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 REXO5Q96IC2 774 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 EGLN2Q96KS0 407 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ZDHHC15Q96MV8 337 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 COG8Q96MW5 612 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 RILPQ96NA2 401 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 WWC2-AS2Q96NR7 200 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 WRNIP1Q96S55 665 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 UHRF1Q96T88 793 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 CIB1Q99828 191 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 SYT11Q9BT88 431 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 KIFC3Q9BVG8 833 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 ANO3Q9BYT9 981 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 TMEM168Q9H0V1 697 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 GOLPH3Q9H4A6 298 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 RAD21L1Q9H4I0 556 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 SERHL2Q9H4I8 314 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 PDZD7Q9H5P4 517 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 NOL6Q9H6R4 1146 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 NEK6Q9HC98 313 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 RAVER2Q9HCJ3 691 aaKnown RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 MYOZ2Q9NPC6 264 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 FBXO8Q9NRD0 319 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 OLAHQ9NV23 265 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 FAM86C1Q9NVL1 165 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 MOCS1Q9NZB8 636 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 PKD2L2Q9NZM6 624 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 KIF17Q9P2E2 1029 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 TBC1D14Q9P2M4 693 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 TBK1Q9UHD2 729 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 RIMS3Q9UJD0 308 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 NUDT5Q9UKK9 219 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 CFL2Q9Y281 166 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 NR2E1Q9Y466 385 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 CSNK1G3Q9Y6M4 447 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 A3GALT2U3KPV4 340 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 MYH4Q9Y623 1939 aa4.75□□□□□ -1.65
PTCD3-212ENST00000477520 COL1A1P02452 1464 aaPredicted RBP4.75□□□□□ -1.65
PTCD3-212ENST00000477520 COL4A5P29400 1685 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 MAST2Q6P0Q8 1798 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 NPHP3-ACAD11A0A0J9YXS1 232 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ZSCAN5BA6NJL1 495 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 CENPXA8MT69 81 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 KLRF2D3W0D1 207 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TAF4O00268 1085 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TRDMT1O14717 391 aaKnown RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 PMM2O15305 246 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 TP73O15350 636 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 ZW10O43264 779 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 DFNA5O60443 496 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 SNNO75324 88 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 DAB1O75553 588 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 BCAS2O75934 225 aaPredicted RBP4.74□□□□□ -1.65
PTCD3-212ENST00000477520 USP1O94782 785 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 PLEKHA8P1O95397 391 aa4.74□□□□□ -1.65
PTCD3-212ENST00000477520 IFNA16P05015 189 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms