RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 STEAP4Q687X5 459 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 SDE2Q6IQ49 451 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 ESRP1Q6NXG1 681 aaKnown RBP9.31□□□□□ -0.92
PGK1-204ENST00000477335 TRMT10BQ6PF06 316 aaKnown RBP9.31□□□□□ -0.92
PGK1-204ENST00000477335 BRAT1Q6PJG6 821 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 CAPN12Q6ZSI9 719 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 SYT13Q7L8C5 426 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 TRMT11Q7Z4G4 463 aaKnown RBP9.31□□□□□ -0.92
PGK1-204ENST00000477335 TMPRSS6Q8IU80 811 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 SYNPOQ8N3V7 929 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 PNPLA1Q8N8W4 532 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 OR13C4Q8NGS5 318 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 OR13J1Q8NGT2 312 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 UHMK1Q8TAS1 419 aaKnown RBP9.31□□□□□ -0.92
PGK1-204ENST00000477335 ANKRD7Q92527 254 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 FAM131CQ96AQ9 280 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 MFSD3Q96ES6 412 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 STAMBPL1Q96FJ0 436 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 SCRN2Q96FV2 425 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 CFAP36Q96G28 342 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 DNAJC1Q96KC8 554 aaKnown RBP9.31□□□□□ -0.92
PGK1-204ENST00000477335 RANBP9Q96S59 729 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 LYSMD1Q96S90 227 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 KIFC1Q9BW19 673 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 ADGRE3Q9BY15 652 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 HDAC8Q9BY41 377 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 FRMD8Q9BZ67 464 aaPredicted RBP9.31□□□□□ -0.92
PGK1-204ENST00000477335 OSBPL6Q9BZF3 934 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 PABPC3Q9H361 631 aaKnown RBP9.31□□□□□ -0.92
PGK1-204ENST00000477335 TREX1Q9NSU2 369 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 SLC17A6Q9P2U8 582 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 EBF1Q9UH73 591 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 RPL26L1Q9UNX3 145 aaKnown RBP9.31□□□□□ -0.92
PGK1-204ENST00000477335 MRPS17Q9Y2R5 130 aaKnown RBP9.31□□□□□ -0.92
PGK1-204ENST00000477335 MAD1L1Q9Y6D9 718 aa9.31□□□□□ -0.92
PGK1-204ENST00000477335 MUC3AQ02505 3323 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 A0A1W2PP55 124 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 GOLGA8CPA6NN73 597 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 C1QTNF3-AMACRE9PGA6 284 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 GAPDHSO14556 408 aaPredicted RBP9.3□□□□□ -0.92
PGK1-204ENST00000477335 RIPK2O43353 540 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 CLDN7O95471 211 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 ADH1BP00325 375 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 SHBGP04278 402 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 TUBBP07437 444 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 PRSS56P0CW18 603 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 HOXB1P14653 301 aaPredicted RBP9.3□□□□□ -0.92
PGK1-204ENST00000477335 C5AR1P21730 350 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 CA4P22748 312 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 ADRA1DP25100 572 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 MCM3P25205 808 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 VIPR1P32241 457 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 HSD17B3P37058 310 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 NEK3P51956 506 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 STC1P52823 247 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 PMS2P54278 862 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 EPHB1P54762 984 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 SARNPP82979 210 aaKnown RBP9.3□□□□□ -0.92
PGK1-204ENST00000477335 PTSQ03393 145 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 DMWDQ09019 674 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 STARD3Q14849 445 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 CRYMQ14894 314 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 EFTUD2Q15029 972 aaKnown RBP eCLIP9.3□□□□□ -0.92
PGK1-204ENST00000477335 TAF1AQ15573 450 aaPredicted RBP9.3□□□□□ -0.92
PGK1-204ENST00000477335 ANKRD20A4Q4UJ75 823 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 TSTD2Q5T7W7 516 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 LRRC66Q68CR7 880 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 EMBQ6PCB8 327 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 KIAA1324Q6UXG2 1013 aaKnown RBP9.3□□□□□ -0.92
PGK1-204ENST00000477335 ERN2Q76MJ5 926 aaKnown RBP9.3□□□□□ -0.92
PGK1-204ENST00000477335 DPPA4Q7L190 304 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 HSD11B1LQ7Z5J1 315 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 DSG4Q86SJ6 1040 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 TMEM135Q86UB9 458 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 CBARPQ8N350 705 aaPredicted RBP9.3□□□□□ -0.92
PGK1-204ENST00000477335 HDDC3Q8N4P3 179 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 BRSK1Q8TDC3 778 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 HCAR2Q8TDS4 363 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 HMGB4Q8WW32 186 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.3□□□□□ -0.92
PGK1-204ENST00000477335 ZNF669Q96BR6 464 aaPredicted RBP9.3□□□□□ -0.92
PGK1-204ENST00000477335 ZBTB9Q96C00 473 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 NELL2Q99435 816 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 IL22Q9GZX6 179 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 MRM3Q9HC36 420 aaKnown RBP9.3□□□□□ -0.92
PGK1-204ENST00000477335 MAGEE1Q9HCI5 957 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 BPIFA1Q9NP55 256 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 SMYD2Q9NRG4 433 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 ZNF446Q9NWS9 450 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.3□□□□□ -0.92
PGK1-204ENST00000477335 BFARQ9NZS9 450 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 SIT1Q9Y3P8 196 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 FADS3Q9Y5Q0 445 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 SCN8AQ9UQD0 1980 aa9.3□□□□□ -0.92
PGK1-204ENST00000477335 FAM237BA0A1B0GVD1 139 aa9.29□□□□□ -0.92
PGK1-204ENST00000477335 TMEM221A6NGB7 291 aa9.29□□□□□ -0.92
PGK1-204ENST00000477335 OR51F1A6NGY5 319 aa9.29□□□□□ -0.92
PGK1-204ENST00000477335 CXorf49A8MYA2 514 aaPredicted RBP9.29□□□□□ -0.92
PGK1-204ENST00000477335 C10orf142B7Z368 130 aa9.29□□□□□ -0.92
PGK1-204ENST00000477335 K7ESF4 209 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms