RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 HMGN1P05114 100 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 SFTPCP11686 197 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 PRKACAP17612 351 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 PSMA4P25789 261 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 CD6P30203 668 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 RPL9P32969 192 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 CYLC1P35663 651 aaPredicted RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 PSMC2P35998 433 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 RXRGP48443 463 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 POLD2P49005 469 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 RGS7P49802 495 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 TOB1P50616 345 aaPredicted RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 CCR3P51677 355 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 IST1P53990 364 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 TNNC1P63316 161 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 MRPS15P82914 257 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 COG7P83436 770 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 PPP2R2BQ00005 443 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 HOXA4Q00056 320 aaPredicted RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 ECT2LQ008S8 904 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 AMPD3Q01432 767 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 TFAP4Q01664 338 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 TLE1Q04724 770 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 POU5F1BQ06416 359 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 GOLGA8FQ08AF8 430 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 GOLGA8DPQ0D2H9 430 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 ST3GAL1Q11201 340 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 FAPQ12884 760 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 GIT2Q14161 759 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 KRT32Q14532 448 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 MTF1Q14872 753 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 TMEM266Q2M3C6 531 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 CFAP221Q4G0U5 840 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 ZNF618Q5T7W0 954 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 NAPRTQ6XQN6 538 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 ZNF600Q6ZNG1 722 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 DCDC5Q6ZRR9 648 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 MCM10Q7L590 875 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 GPR141Q7Z602 305 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 COL23A1Q86Y22 540 aaPredicted RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 C16orf71Q8IYS4 520 aaPredicted RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 LRRC34Q8IZ02 419 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 AFAP1L2Q8N4X5 818 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 NGDNQ8NEJ9 315 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 OR10Z1Q8NGY1 313 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 SLC2A14Q8TDB8 520 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 SCAMP4Q969E2 229 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 CIDECQ96AQ7 238 aaPredicted RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 INTS12Q96CB8 462 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 NMD3Q96D46 503 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 HSPBAP1Q96EW2 488 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 CDCA5Q96FF9 252 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 REXO5Q96IC2 774 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 METTL2AQ96IZ6 378 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 VCPIP1Q96JH7 1222 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 TNIP3Q96KP6 325 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 MOGAT1Q96PD6 335 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 BTBD9Q96Q07 612 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 DMRTA2Q96SC8 542 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 SECISBP2Q96T21 854 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 YME1L1Q96TA2 773 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 ELAC2Q9BQ52 826 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 CCDC77Q9BR77 488 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 TDRD1Q9BXT4 1180 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 CCSER1Q9C0I3 900 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 RBM38Q9H0Z9 239 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 Q9H521 79 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 FANCEQ9HB96 536 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 UBN1Q9NPG3 1134 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 FARSBQ9NSD9 589 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 MRGBPQ9NV56 204 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 INTS9Q9NV88 658 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 TAS2R7Q9NYW3 318 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 HACD3Q9P035 362 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 HMG20BQ9P0W2 317 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 KLHL13Q9P2N7 655 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 EPS15L1Q9UBC2 864 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 ASIC3Q9UHC3 531 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 PCDHA12Q9UN75 941 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 TMA7Q9Y2S6 64 aaKnown RBP4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 SLC45A1Q9Y2W3 748 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 SPEF1Q9Y4P9 236 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 A2MP01023 1474 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 CUL7Q14999 1698 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 CC2D2AQ9P2K1 1620 aa4.53□□□□□ -1.68
PIKFYVE-209ENST00000477200 ARHGEF10O15013 1369 aa4.53□□□□□ -1.69
PIKFYVE-209ENST00000477200 KIAA1210Q9ULL0 1709 aa4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 CRYBG1Q9Y4K1 1723 aa4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 DUOX2Q9NRD8 1548 aa4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 ATP10BO94823 1461 aa4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 MAGEB16A2A368 324 aa4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 GOLGA8IPA6NC78 632 aa4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 EIF4E1BA6NMX2 242 aaKnown RBP4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 MAGEB3O15480 346 aa4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 SCO2O43819 266 aa4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 BRINP1O60477 761 aa4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 DKC1O60832 514 aaKnown RBP eCLIP4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 CSDE1O75534 798 aaKnown RBP4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 PRKD3O94806 890 aa4.52□□□□□ -1.69
PIKFYVE-209ENST00000477200 OR5F1O95221 314 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms