RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ZUFSPQ96AP4 578 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 C18orf25Q96B23 403 aaPredicted RBP6.91□□□□□ -1.3
UBR4-212ENST00000475973 SLCO4A1Q96BD0 722 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 TADA1Q96BN2 335 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 VPS39Q96JC1 886 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 KLHL32Q96NJ5 620 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 FCRL5Q96RD9 977 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 PPP1R16BQ96T49 567 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 AGAP2Q99490 1192 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 DOK1Q99704 481 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 PKP2Q99959 881 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 ADAM2Q99965 735 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 TSPAN10Q9H1Z9 355 aaPredicted RBP6.91□□□□□ -1.3
UBR4-212ENST00000475973 ELAC1Q9H777 363 aaKnown RBP6.91□□□□□ -1.3
UBR4-212ENST00000475973 EFCAB1Q9HAE3 211 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 MEAF6Q9HAF1 191 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 CSNK1G1Q9HCP0 422 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 ATP13A1Q9HD20 1204 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 SLC52A3Q9NQ40 469 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 MRPL40Q9NQ50 206 aaKnown RBP6.91□□□□□ -1.3
UBR4-212ENST00000475973 RGS18Q9NS28 235 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 PIGVQ9NUD9 493 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 OLAHQ9NV23 265 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 ARMC1Q9NVT9 282 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 DUS2Q9NX74 493 aaKnown RBP6.91□□□□□ -1.3
UBR4-212ENST00000475973 TUBA8Q9NY65 449 aaPredicted RBP6.91□□□□□ -1.3
UBR4-212ENST00000475973 SNTG2Q9NY99 539 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 TMEM181Q9P2C4 612 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 TUBGCP4Q9UGJ1 667 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 PTBP2Q9UKA9 531 aaKnown RBP6.91□□□□□ -1.3
UBR4-212ENST00000475973 CDH7Q9ULB5 785 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 VANGL2Q9ULK5 521 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 PCDHGB4Q9UN71 923 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 LZTS1Q9Y250 596 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 PCDHGB5Q9Y5G0 923 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 PCDHGA7Q9Y5G6 932 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.91□□□□□ -1.3
UBR4-212ENST00000475973 AP4B1Q9Y6B7 739 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 MRPL42Q9Y6G3 142 aaKnown RBP6.91□□□□□ -1.3
UBR4-212ENST00000475973 SCN5AQ14524 2016 aa6.91□□□□□ -1.3
UBR4-212ENST00000475973 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 GOLGA8QA0A0J9YX86 632 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 LOC100653049A0A140TA62 436 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 SMIM28A0A1B0GU29 152 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 DYTNA2CJ06 578 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 GOLGA8OA6NCC3 632 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 ARHGAP42A6NI28 874 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 A6NJY4 79 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 TBKBP1A7MCY6 615 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 WASH4PA8MWX3 477 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 GOLGA8NF8WBI6 632 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 H3BNH8 94 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 H3BQ06 376 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 PIK3R2O00459 728 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 FBP2O00757 339 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 NRP1O14786 923 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 GRM6O15303 877 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 KRT34O76011 436 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 TMCC1O94876 653 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 BMP10O95393 424 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 PIGNO95427 931 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 HSPA4LO95757 839 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 CLPTM1O96005 669 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 SRGAP2BP0DMP2 458 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 CDK4P11802 303 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 DARSP14868 501 aaKnown RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 NPR3P17342 541 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 LAG3P18627 525 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 CDH2P19022 906 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 CCNCP24863 283 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 PSMA3P25788 255 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 PMLP29590 882 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 SLC7A1P30825 629 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 SLC5A2P31639 672 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 PPM1AP35813 382 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 GNL1P36915 607 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 GRIA4P48058 902 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 NDUFV1P49821 464 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 CDK9P50750 372 aaKnown RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 NFKB2Q00653 900 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 UBE3AQ05086 875 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 ZBTB17Q13105 803 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 BIRC2Q13490 618 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 SLC12A1Q13621 1099 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 LAMB3Q13751 1172 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 GRM3Q14832 879 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 HSP90AA5PQ58FG0 334 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 NHSL2Q5HYW2 709 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 PCID2Q5JVF3 399 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 TCHHL1Q5QJ38 904 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 RARS2Q5T160 578 aaKnown RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 SYPL2Q5VXT5 272 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 SEL1L3Q68CR1 1132 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 ITPRIPL1Q6GPH6 555 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 KIAA0930Q6ICG6 404 aaPredicted RBP6.9□□□□□ -1.3
UBR4-212ENST00000475973 PKN3Q6P5Z2 889 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 KLHDC10Q6PID8 442 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 RANBP10Q6VN20 620 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 CLEC20AQ6ZU45 233 aa6.9□□□□□ -1.3
UBR4-212ENST00000475973 KCNMB4Q86W47 210 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms