RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 CLUHO75153 1309 aa6.03□□□□□ -1.44
ECHDC1-215ENST00000475319 AOX1Q06278 1338 aa6.03□□□□□ -1.44
ECHDC1-215ENST00000475319 FRMPD4Q14CM0 1322 aa6.03□□□□□ -1.44
ECHDC1-215ENST00000475319 FMN2Q9NZ56 1722 aa6.03□□□□□ -1.44
ECHDC1-215ENST00000475319 USP32Q8NFA0 1604 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 A0A1W2PRG6 482 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 WRBO00258 174 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 PLK4O00444 970 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 SLC22A2O15244 555 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 SPAG7O75391 227 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 RBBP9O75884 186 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 HRGP04196 525 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 AKR1B1P15121 316 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 ZNF18P17022 549 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 RHCEP18577 417 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 RAB3AP20336 220 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 IL6STP40189 918 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 HNF4AP41235 474 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 AFMP43652 599 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 ALDH3B2P48448 385 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 KCNJ5P48544 419 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 CARSP49589 748 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 ARFIP1P53367 373 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 YWHAEP62258 255 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 TNNC1P63316 161 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 IRF9Q00978 393 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 BEX3Q00994 111 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 FLI1Q01543 452 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 BNC1Q01954 994 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 RHDQ02161 417 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 UBE3AQ05086 875 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 TNK2Q07912 1038 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 SGCGQ13326 291 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 TOP3AQ13472 1001 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 CAPRIN1Q14444 709 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 CLCA4Q14CN2 919 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 HERC3Q15034 1050 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 TAF5Q15542 800 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 TEX30Q5JUR7 227 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 PPM1LQ5SGD2 360 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 ZNF648Q5T619 568 aaPredicted RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 NFRKBQ6P4R8 1299 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 CYP20A1Q6UW02 462 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 CYB5R4Q7L1T6 521 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 C2CD5Q86YS7 1000 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 TTC5Q8N0Z6 440 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 PLD5Q8N7P1 536 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 ZNF610Q8N9Z0 462 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 IL17RDQ8NFM7 739 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 OR5H6Q8NGV6 325 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 DENND1AQ8TEH3 1009 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 SSH1Q8WYL5 1049 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 PIK3R3Q92569 461 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 SLC22A18Q96BI1 424 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 TRMT2BQ96GJ1 504 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 C7orf34Q96L11 122 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 PRMT1Q99873 361 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 C1orf50Q9BV19 199 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 JAM3Q9BX67 310 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 ZDHHC5Q9C0B5 715 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 POLR1EQ9GZS1 481 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 PPA2Q9H2U2 334 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 TRIT1Q9H3H1 467 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 EBF3Q9H4W6 596 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 STN1Q9H668 368 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 CAB39LQ9H9S4 337 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 C17orf75Q9HAS0 396 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 PRDM8Q9NQV8 689 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 SEMA3GQ9NS98 782 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 DNAJC17Q9NVM6 304 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 LIMA1Q9UHB6 759 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 TRMT6Q9UJA5 497 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 DBNLQ9UJU6 430 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 RAB26Q9ULW5 256 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 COG5Q9UP83 839 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 PCDHA11Q9Y5I1 949 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 RAD54BQ9Y620 910 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 NWD2Q9ULI1 1742 aa6.02□□□□□ -1.45
ECHDC1-215ENST00000475319 DLC1Q96QB1 1528 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 RAB19A4D1S5 217 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 BTBD18B2RXH4 712 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 TPP1O14773 563 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 PER2O15055 1255 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 GMDSO60547 372 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 UGT1A9O60656 530 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 MAGEC1O60732 1142 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 CIB2O75838 187 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 SEMA3DO95025 777 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 ZNF205O95201 554 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 NDUFA10O95299 355 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 VNN1O95497 513 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 PLGP00747 810 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 AMY2AP04746 511 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 NUDT17P0C025 328 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 SRCP12931 536 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 ENO3P13929 434 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 GLB1P16278 677 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 GJA1P17302 382 aa6.01□□□□□ -1.45
ECHDC1-215ENST00000475319 UGT1A6P19224 532 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 196.1 ms