RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MPPE1Q53F39 396 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 EEF1DP3Q658K8 133 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 PEG10Q86TG7 708 aaKnown RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 ZFP28Q8NHY6 868 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 CD101Q93033 1021 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 XPR1Q9UBH6 696 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 POLR3HQ9Y535 204 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 URADA6NGE7 173 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 ITPKAP23677 461 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 ITGB3BPQ13352 177 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 AUHQ13825 339 aaKnown RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 PSRC1Q6PGN9 363 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 UBE2R2Q712K3 238 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 CAMK1DQ8IU85 385 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 NKX2-3Q8TAU0 364 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 OR8D1Q8WZ84 308 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 FAM163AQ96GL9 167 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 FNDC11Q9BVV2 318 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 RBM7Q9Y580 266 aaKnown RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 hCG_1818297A0A087WSY0 165 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 MCIDASD6RGH6 385 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 OPLAHO14841 1288 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 FAM155BO75949 473 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 PCCBP05166 539 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 ALAS2P22557 587 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 CDC42P60953 191 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 FBXO48Q5FWF7 155 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 GPR158Q5T848 1215 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 LDB1Q86U70 411 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 CDH24Q86UP0 819 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 ZNF557Q8N988 423 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 ATP6V1C2Q8NEY4 427 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 TP53INP1Q96A56 240 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 RCN3Q96D15 328 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 EBNA1BP2Q99848 306 aaKnown RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 TBC1D10AQ9BXI6 508 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 TNKS2Q9H2K2 1166 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 OSER1Q9NX31 292 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 GPN3Q9UHW5 284 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 A0A1W2PPM1 405 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 ERN1O75460 977 aaKnown RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 TNFRSF21O75509 655 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 PGM3O95394 542 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 OTCP00480 354 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 DNTTP04053 509 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 INHBEP58166 350 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 RHBDL3P58872 404 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 ELF3P78545 371 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 PLPPR4Q7Z2D5 763 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 HOMEZQ8IX15 550 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 PRELID2Q8N945 189 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 ZNF248Q8NDW4 579 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 RELTQ969Z4 430 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 ZNF670Q9BS34 389 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 CNGB3Q9NQW8 809 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 PNPOQ9NVS9 261 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 CMTM6Q9NX76 183 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 C15orf41Q9Y2V0 281 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 UBIAD1Q9Y5Z9 338 aa10.99□□□□□ -0.65
VAPB-204ENST00000475243 COL5A2P05997 1499 aaPredicted RBP10.99□□□□□ -0.65
VAPB-204ENST00000475243 BCL9O00512 1426 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 SCAMP1O15126 338 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 FNBP1LQ5T0N5 605 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 OTOP2Q7RTS6 562 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 RAVER1Q8IY67 606 aaKnown RBP10.98□□□□□ -0.65
VAPB-204ENST00000475243 WRAP53Q9BUR4 548 aaKnown RBP10.98□□□□□ -0.65
VAPB-204ENST00000475243 SPATA5L1Q9BVQ7 753 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 PRRG4Q9BZD6 226 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 SGK2Q9HBY8 427 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 ABCB10Q9NRK6 738 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 SH3GLB1Q9Y371 365 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 AP3D1O14617 1153 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 KCNJ2P63252 427 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 LINGO4Q6UY18 593 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 CLIC5Q9NZA1 410 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 CD84Q9UIB8 345 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 CYP3A7-CYP3A51PA0A087WV96 503 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 ITGB5P18084 799 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 CYP3A7P24462 503 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 MED22Q15528 200 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 FKBP1CQ5VVH2 108 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 TAPT1Q6NXT6 567 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 OTOP3Q7RTS5 596 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 GALNT5Q7Z7M9 940 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 AHI1Q8N157 1196 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 ZNF563Q8TA94 476 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 PGM2Q96G03 612 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 P2RY11Q96G91 374 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 PDCD10Q9BUL8 212 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 HIPK3Q9H422 1215 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 GMIPQ9P107 970 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 KCNE2Q9Y6J6 123 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 TCEA3O75764 348 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 HOXC6P09630 235 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 NELFEP18615 380 aaKnown RBP10.98□□□□□ -0.65
VAPB-204ENST00000475243 FLT3LGP49771 235 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 TAF10Q12962 218 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 PERM1Q5SV97 790 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 BHLHB9Q6PI77 547 aa10.98□□□□□ -0.65
VAPB-204ENST00000475243 VANGL1Q8TAA9 524 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms