RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 ALPIP09923 528 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 PEX5P50542 639 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 ZNF211Q13398 564 aaPredicted RBP24.08■■□□□ 1.45
CPNE1-223ENST00000475146 NFATC4Q14934 902 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 TAZQ16635 292 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 TFDP3Q5H9I0 405 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 FAXCQ5TGI0 409 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 B4GALNT4Q76KP1 1039 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 PLA2G15Q8NCC3 412 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 LMX1AQ8TE12 382 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 BTN2A2Q8WVV5 523 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 PIH1D2Q8WWB5 315 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 NUS1Q96E22 293 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 SCRN2Q96FV2 425 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 TDRD1Q9BXT4 1180 aaKnown RBP24.08■■□□□ 1.45
CPNE1-223ENST00000475146 BRD8Q9H0E9 1235 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 CHKBQ9Y259 395 aa24.08■■□□□ 1.45
CPNE1-223ENST00000475146 FZD6O60353 706 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 DKK1O94907 266 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 PECAM1P16284 738 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-223ENST00000475146 GM2AP17900 193 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 TGM2P21980 687 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 LHCGRP22888 699 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 CD86P42081 329 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 NR2C2P49116 596 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 ACADVLP49748 655 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 DAB2P98082 770 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 PPARDQ03181 441 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 IHHQ14623 411 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 PTPRRQ15256 657 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 ENPP7Q6UWV6 458 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 DHRS13Q6UX07 377 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 BZW1Q7L1Q6 419 aaKnown RBP24.07■■□□□ 1.44
CPNE1-223ENST00000475146 TSPAN33Q86UF1 283 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 CNTD1Q8N815 330 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 EXD1Q8NHP7 514 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 COQ10AQ96MF6 247 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 MCCC1Q96RQ3 725 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-223ENST00000475146 DESI2Q9BSY9 194 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 SLC13A1Q9BZW2 595 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 TCEAL2Q9H3H9 227 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-223ENST00000475146 NLGN3Q9NZ94 848 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 SAE1Q9UBE0 346 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-223ENST00000475146 SPASTQ9UBP0 616 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 MSRB2Q9Y3D2 182 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 PCDHGA1Q9Y5H4 931 aa24.07■■□□□ 1.44
CPNE1-223ENST00000475146 hCG_1818297A0A087WSY0 165 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 SCAMP1O15126 338 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 PJA2O43164 708 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 AQP9O43315 295 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 RFPL3O75679 317 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 CKMT2P17540 419 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 PROX2Q3B8N5 592 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 FAM182AQ5T1J6 154 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 HSD11B1LQ7Z5J1 315 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 TXLNBQ8N3L3 684 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 LPCAT1Q8NF37 534 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 ATL2Q8NHH9 583 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 KIAA1524Q8TCG1 905 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 P3H4Q92791 437 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 HAUS1Q96CS2 278 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 AGAP3Q96P47 875 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 SMIM14Q96QK8 99 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 PCDH9Q9HC56 1237 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 PNMA8BQ9ULN7 279 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-223ENST00000475146 PPIL1Q9Y3C6 166 aa24.06■■□□□ 1.44
CPNE1-223ENST00000475146 ARID1BQ8NFD5 2236 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-223ENST00000475146 K7ESM1 405 aa24.05■■□□□ 1.44
CPNE1-223ENST00000475146 PSMD11O00231 422 aa24.05■■□□□ 1.44
CPNE1-223ENST00000475146 CACNB4O00305 520 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-223ENST00000475146 CTNNA1P35221 906 aaKnown RBP24.05■■□□□ 1.44
CPNE1-223ENST00000475146 HNF1BP35680 557 aa24.05■■□□□ 1.44
CPNE1-223ENST00000475146 PRRT3Q5FWE3 981 aa24.05■■□□□ 1.44
CPNE1-223ENST00000475146 UNQ6494/PRO21346Q6UXR6 183 aa24.05■■□□□ 1.44
CPNE1-223ENST00000475146 HID1Q8IV36 788 aa24.05■■□□□ 1.44
CPNE1-223ENST00000475146 TFB1MQ8WVM0 346 aaKnown RBP24.05■■□□□ 1.44
CPNE1-223ENST00000475146 DTD2Q96FN9 168 aa24.05■■□□□ 1.44
CPNE1-223ENST00000475146 WDR92Q96MX6 357 aa24.05■■□□□ 1.44
CPNE1-223ENST00000475146 DUSP23Q9BVJ7 150 aa24.05■■□□□ 1.44
CPNE1-223ENST00000475146 KLQ9UEF7 1012 aa24.05■■□□□ 1.44
CPNE1-223ENST00000475146 CSNK1G3Q9Y6M4 447 aa24.05■■□□□ 1.44
CPNE1-223ENST00000475146 A0A0J9YYE9 177 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 A0A0U1RQS6 177 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 MACROD2A1Z1Q3 448 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 GOLGA6CA6NDK9 693 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 GOLGA6BA6NDN3 693 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 C1QTNF9BB2RNN3 333 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 TRBC1P01850 177 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 MMP2P08253 660 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 C1QTNF9P0C862 333 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 GOLGA6DP0CG33 693 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 GIMD1P0DJR0 217 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 ETV3P41162 512 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 BLKP51451 505 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 SKOR1P84550 965 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 ADCY2Q08462 1091 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 KIF5AQ12840 1032 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 C1orf61Q13536 156 aa24.04■■□□□ 1.44
CPNE1-223ENST00000475146 PRKD1Q15139 912 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-223ENST00000475146 PPP2R5EQ16537 467 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms