RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 ATP5BP06576 529 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 INHBAP08476 426 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SNRPAP09012 282 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 HNRNPLP14866 589 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 PAMP19021 973 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 NR1D1P20393 614 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 GABRB3P28472 473 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SERPINA4P29622 427 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 GBP2P32456 591 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 HMGCLP35914 325 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 HADHAP40939 763 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 CCNFP41002 786 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SLC6A11P48066 632 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 POLD2P49005 469 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 STK19P49842 368 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 LIMK2P53671 638 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 CSE1LP55060 971 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 PPP2R2AP63151 447 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 PDE1BQ01064 536 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 BCL2L1Q07817 233 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SMAD4Q13485 552 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 CNGA3Q16281 694 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SKIDA1Q1XH10 827 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 ITPRIPL2Q3MIP1 535 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 PREPLQ4J6C6 727 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 ATXN7L2Q5T6C5 722 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 ARMC12Q5T9G4 340 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 LGSNQ5TDP6 509 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 KCTD16Q68DU8 428 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 GRAMD4Q6IC98 578 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 CES3Q6UWW8 571 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 PACS1Q6VY07 963 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 DPY19L3Q6ZPD9 716 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 CAPN12Q6ZSI9 719 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 TAOK1Q7L7X3 1001 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 ZSWIM9Q86XI8 627 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SUGP1Q8IWZ8 645 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 RAVER1Q8IY67 606 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 CBARPQ8N350 705 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SLC25A41Q8N5S1 370 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 PPM1NQ8N819 430 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 NAT16Q8N8M0 369 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 TERB1Q8NA31 727 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 C2CD4AQ8NCU7 369 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 TTC16Q8NEE8 873 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 MDGA1Q8NFP4 955 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 FAM76AQ8TAV0 307 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 DTX3LQ8TDB6 740 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 ACMSDQ8TDX5 336 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 DENND1AQ8TEH3 1009 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 HPS1Q92902 700 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 PTPRN2Q92932 1015 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 ZNF669Q96BR6 464 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 ALKBH8Q96BT7 664 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SCRN2Q96FV2 425 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 ZFYVE19Q96K21 471 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 RPL10LQ96L21 214 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 UHRF1Q96T88 793 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 RPP25Q9BUL9 199 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 TRMT61BQ9BVS5 477 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SUV39H2Q9H5I1 410 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 ATP13A3Q9H7F0 1226 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 CNOT10Q9H9A5 744 aaKnown RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 UGT1A7Q9HAW7 530 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 UGT1A10Q9HAW8 530 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 UGT1A8Q9HAW9 530 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 PRDM9Q9NQV7 894 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 IL17CQ9P0M4 197 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 THAP10Q9P2Z0 257 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 HECAQ9UBI9 543 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SLC2A6Q9UGQ3 507 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 EVLQ9UI08 416 aaPredicted RBP6.64□□□□□ -1.35
ATG4A-207ENST00000474825 ADAM21Q9UKJ8 722 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 HCN2Q9UL51 889 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 PHTF1Q9UMS5 762 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 SPO11Q9Y5K1 396 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 WASF2Q9Y6W5 498 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 COL4A3Q01955 1670 aa6.64□□□□□ -1.35
ATG4A-207ENST00000474825 A0A1W2PPM1 405 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 CAPN8A6NHC0 703 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 C2orf81A6NN90 581 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 AGAP14A8MT82 685 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 AURKAO14965 403 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 MBTPS2O43462 519 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 RPP40O75818 363 aaKnown RBP6.63□□□□□ -1.35
ATG4A-207ENST00000474825 PIAS1O75925 651 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 VAPBO95292 243 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 ERVK-10P10266 1014 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 BMP1P13497 986 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 CREB1P16220 341 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 LPOP22079 712 aaPredicted RBP6.63□□□□□ -1.35
ATG4A-207ENST00000474825 GDI1P31150 447 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 SLC8A1P32418 973 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 NNMTP40261 264 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 GRIA2P42262 883 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 TNFRSF4P43489 277 aa6.63□□□□□ -1.35
ATG4A-207ENST00000474825 LEPRP48357 1165 aaKnown RBP6.63□□□□□ -1.35
ATG4A-207ENST00000474825 NUMBP49757 651 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms